==563365== Memcheck, a memory error detector ==563365== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==563365== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==563365== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningVertexBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==563365== Parent PID: 547643 ==563365== ==563365== ==563365== FILE DESCRIPTORS: 9 open (3 std) at exit. ==563365== Open file descriptor 12: ==563365== at 0x10D8C22D: pipe (pipe.c:29) ==563365== by 0x196A507D: ??? ==563365== by 0x14C134CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==563365== by 0x105AD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==563365== by 0x10546D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==563365== by 0xF21DD38: PetscInitialize (pinit.c:924) ==563365== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==563365== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==563365== by 0x1298A9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==563365== by 0x124A2D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==563365== by 0x1270AA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==563365== by 0x126F4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==563365== by 0x1275E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==563365== by 0x122E55: main (TestRunningVertexBasedSimulationsTutorial.cpp:19) ==563365== ==563365== Open file descriptor 8: /dev/shm/open_mpi.0000 ==563365== at 0x10D90BCC: __open_nocancel (open64_nocancel.c:39) ==563365== by 0x10D14C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==563365== by 0x104A7822: ??? ==563365== by 0x104A796F: ??? ==563365== by 0x14CB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==563365== by 0x14CB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==563365== by 0x14C6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==563365== by 0x14C132DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==563365== by 0x105AD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==563365== by 0x10546D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==563365== by 0xF21DD38: PetscInitialize (pinit.c:924) ==563365== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==563365== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==563365== by 0x1298A9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==563365== by 0x124A2D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==563365== by 0x1270AA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==563365== by 0x126F4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==563365== by 0x1275E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==563365== by 0x122E55: main (TestRunningVertexBasedSimulationsTutorial.cpp:19) ==563365== ==563365== Open file descriptor 115: ==563365== ==563365== ==563365== Open file descriptor 112: ==563365== ==563365== ==563365== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningVertexBasedSimulationsTutorial_valgrind.txt ==563365== ==563365== ==563365== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==563365== ==563365== ==563365== ==563365== HEAP SUMMARY: ==563365== in use at exit: 700,754 bytes in 9,378 blocks ==563365== total heap usage: 1,401,083 allocs, 1,391,705 frees, 1,413,543,038 bytes allocated ==563365== ==563365== LEAK SUMMARY: ==563365== definitely lost: 0 bytes in 0 blocks ==563365== indirectly lost: 0 bytes in 0 blocks ==563365== possibly lost: 0 bytes in 0 blocks ==563365== still reachable: 56 bytes in 3 blocks ==563365== suppressed: 700,698 bytes in 9,375 blocks ==563365== Reachable blocks (those to which a pointer was found) are not shown. ==563365== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==563365== ==563365== For lists of detected and suppressed errors, rerun with: -s ==563365== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)