==630837== Memcheck, a memory error detector ==630837== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==630837== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==630837== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation3d -malloc_debug -malloc_dump -memory_info ==630837== Parent PID: 628576 ==630837== ==630837== ==630837== FILE DESCRIPTORS: 9 open (3 std) at exit. ==630837== Open file descriptor 12: ==630837== at 0x10DCE22D: pipe (pipe.c:29) ==630837== by 0x196A507D: ??? ==630837== by 0x14C134CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==630837== by 0x105EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==630837== by 0x10588D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==630837== by 0xF27FD38: PetscInitialize (pinit.c:924) ==630837== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==630837== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==630837== by 0x1FF4E9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==630837== by 0x1F945F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==630837== by 0x1FC774: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==630837== by 0x1FC670: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==630837== by 0x1FCC83: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==630837== by 0x1F7C55: main (TestOffLatticeSimulation3d.cpp:18) ==630837== ==630837== Open file descriptor 8: /dev/shm/open_mpi.0000 ==630837== at 0x10DD2BCC: __open_nocancel (open64_nocancel.c:39) ==630837== by 0x10D56C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==630837== by 0xF129822: ??? ==630837== by 0xF12996F: ??? ==630837== by 0x14CB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==630837== by 0x14CB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==630837== by 0x14C6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==630837== by 0x14C132DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==630837== by 0x105EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==630837== by 0x10588D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==630837== by 0xF27FD38: PetscInitialize (pinit.c:924) ==630837== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==630837== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==630837== by 0x1FF4E9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==630837== by 0x1F945F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==630837== by 0x1FC774: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==630837== by 0x1FC670: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==630837== by 0x1FCC83: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==630837== by 0x1F7C55: main (TestOffLatticeSimulation3d.cpp:18) ==630837== ==630837== Open file descriptor 115: ==630837== ==630837== ==630837== Open file descriptor 112: ==630837== ==630837== ==630837== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation3d_valgrind.txt ==630837== ==630837== ==630837== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==630837== ==630837== ==630837== ==630837== HEAP SUMMARY: ==630837== in use at exit: 700,754 bytes in 9,378 blocks ==630837== total heap usage: 857,071 allocs, 847,693 frees, 1,519,168,583 bytes allocated ==630837== ==630837== LEAK SUMMARY: ==630837== definitely lost: 0 bytes in 0 blocks ==630837== indirectly lost: 0 bytes in 0 blocks ==630837== possibly lost: 0 bytes in 0 blocks ==630837== still reachable: 56 bytes in 3 blocks ==630837== suppressed: 700,698 bytes in 9,375 blocks ==630837== Reachable blocks (those to which a pointer was found) are not shown. ==630837== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==630837== ==630837== For lists of detected and suppressed errors, rerun with: -s ==630837== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)