==631437== Memcheck, a memory error detector ==631437== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==631437== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==631437== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==631437== Parent PID: 628576 ==631437== ==631437== ==631437== FILE DESCRIPTORS: 9 open (3 std) at exit. ==631437== Open file descriptor 12: ==631437== at 0xFD9522D: pipe (pipe.c:29) ==631437== by 0x196A407D: ??? ==631437== by 0x14DCB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==631437== by 0x119F1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==631437== by 0x1198AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==631437== by 0x10681D38: PetscInitialize (pinit.c:924) ==631437== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==631437== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==631437== by 0x1D4486: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==631437== by 0x1CDDB9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==631437== by 0x1D1554: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==631437== by 0x1D13F4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==631437== by 0x1D1A8B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==631437== by 0x1CC1D5: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==631437== ==631437== Open file descriptor 8: /dev/shm/open_mpi.0000 ==631437== at 0xFD99BCC: __open_nocancel (open64_nocancel.c:39) ==631437== by 0xFD1DC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==631437== by 0xF129822: ??? ==631437== by 0xF12996F: ??? ==631437== by 0x14E706DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==631437== by 0x14E70938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==631437== by 0x14E26922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==631437== by 0x14DCB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==631437== by 0x119F1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==631437== by 0x1198AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==631437== by 0x10681D38: PetscInitialize (pinit.c:924) ==631437== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==631437== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==631437== by 0x1D4486: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==631437== by 0x1CDDB9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==631437== by 0x1D1554: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==631437== by 0x1D13F4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==631437== by 0x1D1A8B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==631437== by 0x1CC1D5: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==631437== ==631437== Open file descriptor 115: ==631437== ==631437== ==631437== Open file descriptor 112: ==631437== ==631437== ==631437== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithCaBasedCellPopulation_valgrind.txt ==631437== ==631437== ==631437== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==631437== ==631437== ==631437== ==631437== HEAP SUMMARY: ==631437== in use at exit: 700,686 bytes in 9,374 blocks ==631437== total heap usage: 7,097,861 allocs, 7,088,487 frees, 8,099,031,671 bytes allocated ==631437== ==631437== LEAK SUMMARY: ==631437== definitely lost: 0 bytes in 0 blocks ==631437== indirectly lost: 0 bytes in 0 blocks ==631437== possibly lost: 0 bytes in 0 blocks ==631437== still reachable: 56 bytes in 3 blocks ==631437== suppressed: 700,630 bytes in 9,371 blocks ==631437== Reachable blocks (those to which a pointer was found) are not shown. ==631437== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==631437== ==631437== For lists of detected and suppressed errors, rerun with: -s ==631437== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)