==644239== Memcheck, a memory error detector ==644239== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==644239== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==644239== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningMeshBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==644239== Parent PID: 628576 ==644239== ==644239== ==644239== FILE DESCRIPTORS: 9 open (3 std) at exit. ==644239== Open file descriptor 12: ==644239== at 0x10CA522D: pipe (pipe.c:29) ==644239== by 0x196A507D: ??? ==644239== by 0x14C134CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==644239== by 0x105AD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==644239== by 0x10546D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==644239== by 0xF21DD38: PetscInitialize (pinit.c:924) ==644239== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==644239== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==644239== by 0x1222CD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==644239== by 0x11D84D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==644239== by 0x11FE3C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==644239== by 0x11FCDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==644239== by 0x120373: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==644239== by 0x11BC75: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==644239== ==644239== Open file descriptor 8: /dev/shm/open_mpi.0000 ==644239== at 0x10CA9BCC: __open_nocancel (open64_nocancel.c:39) ==644239== by 0x10C2DC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==644239== by 0x104A7822: ??? ==644239== by 0x104A796F: ??? ==644239== by 0x14CB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==644239== by 0x14CB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==644239== by 0x14C6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==644239== by 0x14C132DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==644239== by 0x105AD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==644239== by 0x10546D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==644239== by 0xF21DD38: PetscInitialize (pinit.c:924) ==644239== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==644239== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==644239== by 0x1222CD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==644239== by 0x11D84D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==644239== by 0x11FE3C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==644239== by 0x11FCDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==644239== by 0x120373: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==644239== by 0x11BC75: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==644239== ==644239== Open file descriptor 115: ==644239== ==644239== ==644239== Open file descriptor 112: ==644239== ==644239== ==644239== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedSimulationsTutorial_valgrind.txt ==644239== ==644239== ==644239== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==644239== ==644239== ==644239== ==644239== HEAP SUMMARY: ==644239== in use at exit: 700,754 bytes in 9,378 blocks ==644239== total heap usage: 3,340,072 allocs, 3,330,694 frees, 2,282,311,149 bytes allocated ==644239== ==644239== LEAK SUMMARY: ==644239== definitely lost: 0 bytes in 0 blocks ==644239== indirectly lost: 0 bytes in 0 blocks ==644239== possibly lost: 0 bytes in 0 blocks ==644239== still reachable: 56 bytes in 3 blocks ==644239== suppressed: 700,698 bytes in 9,375 blocks ==644239== Reachable blocks (those to which a pointer was found) are not shown. ==644239== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==644239== ==644239== For lists of detected and suppressed errors, rerun with: -s ==644239== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)