==644319== Memcheck, a memory error detector ==644319== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==644319== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==644319== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningTumourSpheroidSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==644319== Parent PID: 628576 ==644319== ==644319== ==644319== FILE DESCRIPTORS: 9 open (3 std) at exit. ==644319== Open file descriptor 12: ==644319== at 0xFB8B22D: pipe (pipe.c:29) ==644319== by 0x196A407D: ??? ==644319== by 0x14CA74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==644319== by 0x1148E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==644319== by 0x11427D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==644319== by 0x1011CD38: PetscInitialize (pinit.c:924) ==644319== by 0xF4912DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==644319== by 0xF49132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==644319== by 0x11CA56: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==644319== by 0x118313: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==644319== by 0x11A5FE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==644319== by 0x11A4F9: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==644319== by 0x11AB0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==644319== by 0x116B15: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==644319== ==644319== Open file descriptor 8: /dev/shm/open_mpi.0000 ==644319== at 0xFB8FBCC: __open_nocancel (open64_nocancel.c:39) ==644319== by 0xFB13C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==644319== by 0xF4C6822: ??? ==644319== by 0xF4C696F: ??? ==644319== by 0x14D4C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==644319== by 0x14D4C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==644319== by 0x14D02922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==644319== by 0x14CA72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==644319== by 0x1148E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==644319== by 0x11427D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==644319== by 0x1011CD38: PetscInitialize (pinit.c:924) ==644319== by 0xF4912DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==644319== by 0xF49132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==644319== by 0x11CA56: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==644319== by 0x118313: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==644319== by 0x11A5FE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==644319== by 0x11A4F9: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==644319== by 0x11AB0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==644319== by 0x116B15: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==644319== ==644319== Open file descriptor 115: ==644319== ==644319== ==644319== Open file descriptor 112: ==644319== ==644319== ==644319== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningTumourSpheroidSimulationsTutorial_valgrind.txt ==644319== ==644319== ==644319== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==644319== ==644319== ==644319== ==644319== HEAP SUMMARY: ==644319== in use at exit: 700,754 bytes in 9,378 blocks ==644319== total heap usage: 2,086,465 allocs, 2,077,087 frees, 1,689,977,338 bytes allocated ==644319== ==644319== LEAK SUMMARY: ==644319== definitely lost: 0 bytes in 0 blocks ==644319== indirectly lost: 0 bytes in 0 blocks ==644319== possibly lost: 0 bytes in 0 blocks ==644319== still reachable: 56 bytes in 3 blocks ==644319== suppressed: 700,698 bytes in 9,375 blocks ==644319== Reachable blocks (those to which a pointer was found) are not shown. ==644319== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==644319== ==644319== For lists of detected and suppressed errors, rerun with: -s ==644319== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)