==935305== Memcheck, a memory error detector ==935305== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==935305== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==935305== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==935305== Parent PID: 933629 ==935305== ==935305== ==935305== FILE DESCRIPTORS: 9 open (3 std) at exit. ==935305== Open file descriptor 12: ==935305== at 0xDBDE22D: pipe (pipe.c:29) ==935305== by 0x196A407D: ??? ==935305== by 0x14CA94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==935305== by 0x1148E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==935305== by 0x11427D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==935305== by 0x1011ED38: PetscInitialize (pinit.c:924) ==935305== by 0xD4A02DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==935305== by 0xD4A032D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==935305== by 0x132B46: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==935305== by 0x12BE43: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==935305== by 0x12E998: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==935305== by 0x12E893: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==935305== by 0x12EEA7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==935305== by 0x12A645: main (TestCaUpdateRules.cpp:18) ==935305== ==935305== Open file descriptor 8: /dev/shm/open_mpi.0000 ==935305== at 0xDBE2BCC: __open_nocancel (open64_nocancel.c:39) ==935305== by 0xDB66C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==935305== by 0xD4D5822: ??? ==935305== by 0xD4D596F: ??? ==935305== by 0x14D4E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==935305== by 0x14D4E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==935305== by 0x14D04922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==935305== by 0x14CA92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==935305== by 0x1148E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==935305== by 0x11427D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==935305== by 0x1011ED38: PetscInitialize (pinit.c:924) ==935305== by 0xD4A02DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==935305== by 0xD4A032D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==935305== by 0x132B46: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==935305== by 0x12BE43: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==935305== by 0x12E998: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==935305== by 0x12E893: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==935305== by 0x12EEA7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==935305== by 0x12A645: main (TestCaUpdateRules.cpp:18) ==935305== ==935305== Open file descriptor 115: ==935305== ==935305== ==935305== Open file descriptor 112: ==935305== ==935305== ==935305== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==935305== ==935305== ==935305== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==935305== ==935305== ==935305== ==935305== HEAP SUMMARY: ==935305== in use at exit: 700,754 bytes in 9,378 blocks ==935305== total heap usage: 58,002 allocs, 48,624 frees, 1,354,259,776 bytes allocated ==935305== ==935305== LEAK SUMMARY: ==935305== definitely lost: 0 bytes in 0 blocks ==935305== indirectly lost: 0 bytes in 0 blocks ==935305== possibly lost: 0 bytes in 0 blocks ==935305== still reachable: 56 bytes in 3 blocks ==935305== suppressed: 700,698 bytes in 9,375 blocks ==935305== Reachable blocks (those to which a pointer was found) are not shown. ==935305== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==935305== ==935305== For lists of detected and suppressed errors, rerun with: -s ==935305== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)