==949139== Memcheck, a memory error detector ==949139== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==949139== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==949139== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewSrnModelTutorial -malloc_debug -malloc_dump -memory_info ==949139== Parent PID: 933629 ==949139== ==949139== ==949139== FILE DESCRIPTORS: 9 open (3 std) at exit. ==949139== Open file descriptor 12: ==949139== at 0x1101122D: pipe (pipe.c:29) ==949139== by 0x196A407D: ??? ==949139== by 0x14C5A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==949139== by 0x10832418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==949139== by 0x107CBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==949139== by 0xF4C2D38: PetscInitialize (pinit.c:924) ==949139== by 0xF3372DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==949139== by 0xF33732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==949139== by 0x261089: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==949139== by 0x25978B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==949139== by 0x25E30E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==949139== by 0x25E1AF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==949139== by 0x25E845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==949139== by 0x255DF5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==949139== ==949139== Open file descriptor 8: /dev/shm/open_mpi.0000 ==949139== at 0x11015BCC: __open_nocancel (open64_nocancel.c:39) ==949139== by 0x10F99C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==949139== by 0xF36C822: ??? ==949139== by 0xF36C96F: ??? ==949139== by 0x14CFF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==949139== by 0x14CFF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==949139== by 0x14CB5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==949139== by 0x14C5A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==949139== by 0x10832418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==949139== by 0x107CBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==949139== by 0xF4C2D38: PetscInitialize (pinit.c:924) ==949139== by 0xF3372DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==949139== by 0xF33732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==949139== by 0x261089: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==949139== by 0x25978B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==949139== by 0x25E30E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==949139== by 0x25E1AF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==949139== by 0x25E845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==949139== by 0x255DF5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==949139== ==949139== Open file descriptor 115: ==949139== ==949139== ==949139== Open file descriptor 112: ==949139== ==949139== ==949139== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewSrnModelTutorial_valgrind.txt ==949139== ==949139== ==949139== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==949139== ==949139== ==949139== ==949139== HEAP SUMMARY: ==949139== in use at exit: 700,686 bytes in 9,374 blocks ==949139== total heap usage: 3,821,061 allocs, 3,811,687 frees, 1,524,970,577 bytes allocated ==949139== ==949139== LEAK SUMMARY: ==949139== definitely lost: 0 bytes in 0 blocks ==949139== indirectly lost: 0 bytes in 0 blocks ==949139== possibly lost: 0 bytes in 0 blocks ==949139== still reachable: 56 bytes in 3 blocks ==949139== suppressed: 700,630 bytes in 9,371 blocks ==949139== Reachable blocks (those to which a pointer was found) are not shown. ==949139== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==949139== ==949139== For lists of detected and suppressed errors, rerun with: -s ==949139== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)