==935439== Memcheck, a memory error detector ==935439== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==935439== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==935439== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulationWithGhostNodes -malloc_debug -malloc_dump -memory_info ==935439== Parent PID: 933629 ==935439== ==935439== ==935439== FILE DESCRIPTORS: 9 open (3 std) at exit. ==935439== Open file descriptor 12: ==935439== at 0x10D8C22D: pipe (pipe.c:29) ==935439== by 0x196A507D: ??? ==935439== by 0x14C134CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==935439== by 0x105AD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==935439== by 0x10546D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==935439== by 0xF21DD38: PetscInitialize (pinit.c:924) ==935439== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==935439== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==935439== by 0x159CA9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==935439== by 0x1521AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==935439== by 0x15565A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==935439== by 0x1554FA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==935439== by 0x155B91: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==935439== by 0x1505D5: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==935439== ==935439== Open file descriptor 8: /dev/shm/open_mpi.0000 ==935439== at 0x10D90BCC: __open_nocancel (open64_nocancel.c:39) ==935439== by 0x10D14C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==935439== by 0x104A7822: ??? ==935439== by 0x104A796F: ??? ==935439== by 0x14CB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==935439== by 0x14CB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==935439== by 0x14C6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==935439== by 0x14C132DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==935439== by 0x105AD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==935439== by 0x10546D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==935439== by 0xF21DD38: PetscInitialize (pinit.c:924) ==935439== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==935439== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==935439== by 0x159CA9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==935439== by 0x1521AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==935439== by 0x15565A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==935439== by 0x1554FA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==935439== by 0x155B91: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==935439== by 0x1505D5: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==935439== ==935439== Open file descriptor 115: ==935439== ==935439== ==935439== Open file descriptor 112: ==935439== ==935439== ==935439== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulationWithGhostNodes_valgrind.txt ==935439== ==935439== ==935439== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==935439== ==935439== ==935439== ==935439== HEAP SUMMARY: ==935439== in use at exit: 700,754 bytes in 9,378 blocks ==935439== total heap usage: 223,956 allocs, 214,578 frees, 1,378,771,415 bytes allocated ==935439== ==935439== LEAK SUMMARY: ==935439== definitely lost: 0 bytes in 0 blocks ==935439== indirectly lost: 0 bytes in 0 blocks ==935439== possibly lost: 0 bytes in 0 blocks ==935439== still reachable: 56 bytes in 3 blocks ==935439== suppressed: 700,698 bytes in 9,375 blocks ==935439== Reachable blocks (those to which a pointer was found) are not shown. ==935439== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==935439== ==935439== For lists of detected and suppressed errors, rerun with: -s ==935439== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)