==935463== Memcheck, a memory error detector ==935463== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==935463== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==935463== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithBuskeUpdate -malloc_debug -malloc_dump -memory_info ==935463== Parent PID: 933629 ==935463== ==935463== ==935463== FILE DESCRIPTORS: 9 open (3 std) at exit. ==935463== Open file descriptor 12: ==935463== at 0xF83022D: pipe (pipe.c:29) ==935463== by 0x196A507D: ??? ==935463== by 0x14CB14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==935463== by 0x1148E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==935463== by 0x11427D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==935463== by 0x1011CD38: PetscInitialize (pinit.c:924) ==935463== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==935463== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==935463== by 0x2CC5B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==935463== by 0x2C3A9F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==935463== by 0x2C7EB8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==935463== by 0x2C7DB3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==935463== by 0x2C83C7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==935463== by 0x2C2295: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==935463== ==935463== Open file descriptor 8: /dev/shm/open_mpi.0000 ==935463== at 0xF834BCC: __open_nocancel (open64_nocancel.c:39) ==935463== by 0xF7B8C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==935463== by 0xF129822: ??? ==935463== by 0xF12996F: ??? ==935463== by 0x14D566DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==935463== by 0x14D56938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==935463== by 0x14D0C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==935463== by 0x14CB12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==935463== by 0x1148E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==935463== by 0x11427D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==935463== by 0x1011CD38: PetscInitialize (pinit.c:924) ==935463== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==935463== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==935463== by 0x2CC5B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==935463== by 0x2C3A9F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==935463== by 0x2C7EB8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==935463== by 0x2C7DB3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==935463== by 0x2C83C7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==935463== by 0x2C2295: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==935463== ==935463== Open file descriptor 115: ==935463== ==935463== ==935463== Open file descriptor 112: ==935463== ==935463== ==935463== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithBuskeUpdate_valgrind.txt ==935463== ==935463== ==935463== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==935463== ==935463== ==935463== ==935463== HEAP SUMMARY: ==935463== in use at exit: 700,754 bytes in 9,378 blocks ==935463== total heap usage: 59,258 allocs, 49,880 frees, 1,355,287,700 bytes allocated ==935463== ==935463== LEAK SUMMARY: ==935463== definitely lost: 0 bytes in 0 blocks ==935463== indirectly lost: 0 bytes in 0 blocks ==935463== possibly lost: 0 bytes in 0 blocks ==935463== still reachable: 56 bytes in 3 blocks ==935463== suppressed: 700,698 bytes in 9,375 blocks ==935463== Reachable blocks (those to which a pointer was found) are not shown. ==935463== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==935463== ==935463== For lists of detected and suppressed errors, rerun with: -s ==935463== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)