==998133== Memcheck, a memory error detector ==998133== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==998133== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==998133== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==998133== Parent PID: 992499 ==998133== ==998133== ==998133== FILE DESCRIPTORS: 9 open (3 std) at exit. ==998133== Open file descriptor 12: ==998133== at 0xFC7422D: pipe (pipe.c:29) ==998133== by 0x196A407D: ??? ==998133== by 0x14CA74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==998133== by 0x11575418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==998133== by 0x1150ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==998133== by 0x10205D38: PetscInitialize (pinit.c:924) ==998133== by 0xF4912DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==998133== by 0xF49132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==998133== by 0x135832: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==998133== by 0x1303C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==998133== by 0x133048: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==998133== by 0x132EE8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==998133== by 0x13357F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==998133== by 0x12E7B5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==998133== ==998133== Open file descriptor 8: /dev/shm/open_mpi.0000 ==998133== at 0xFC78BCC: __open_nocancel (open64_nocancel.c:39) ==998133== by 0xFBFCC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==998133== by 0xF4C6822: ??? ==998133== by 0xF4C696F: ??? ==998133== by 0x14D4C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==998133== by 0x14D4C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==998133== by 0x14D02922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==998133== by 0x14CA72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==998133== by 0x11575418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==998133== by 0x1150ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==998133== by 0x10205D38: PetscInitialize (pinit.c:924) ==998133== by 0xF4912DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==998133== by 0xF49132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==998133== by 0x135832: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==998133== by 0x1303C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==998133== by 0x133048: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==998133== by 0x132EE8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==998133== by 0x13357F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==998133== by 0x12E7B5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==998133== ==998133== Open file descriptor 115: ==998133== ==998133== ==998133== Open file descriptor 112: ==998133== ==998133== ==998133== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPdes_valgrind.txt ==998133== ==998133== ==998133== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==998133== ==998133== ==998133== ==998133== HEAP SUMMARY: ==998133== in use at exit: 700,754 bytes in 9,378 blocks ==998133== total heap usage: 2,359,052 allocs, 2,349,674 frees, 1,791,565,319 bytes allocated ==998133== ==998133== LEAK SUMMARY: ==998133== definitely lost: 0 bytes in 0 blocks ==998133== indirectly lost: 0 bytes in 0 blocks ==998133== possibly lost: 0 bytes in 0 blocks ==998133== still reachable: 56 bytes in 3 blocks ==998133== suppressed: 700,698 bytes in 9,375 blocks ==998133== Reachable blocks (those to which a pointer was found) are not shown. ==998133== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==998133== ==998133== For lists of detected and suppressed errors, rerun with: -s ==998133== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)