==1008379== Memcheck, a memory error detector ==1008379== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1008379== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1008379== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVanLeeuwen2009WntSwatCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==1008379== Parent PID: 992499 ==1008379== ==1008379== ==1008379== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1008379== Open file descriptor 12: ==1008379== at 0x127EA22D: pipe (pipe.c:29) ==1008379== by 0x1B36607D: ??? ==1008379== by 0x1651F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1008379== by 0x120F4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1008379== by 0x1208DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1008379== by 0x10D82D38: PetscInitialize (pinit.c:924) ==1008379== by 0x10BF72DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1008379== by 0x10BF732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1008379== by 0x136AAD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1008379== by 0x13133D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1008379== by 0x1340EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1008379== by 0x133F8C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1008379== by 0x134623: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1008379== by 0x12F765: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==1008379== ==1008379== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1008379== at 0x127EEBCC: __open_nocancel (open64_nocancel.c:39) ==1008379== by 0x12772C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1008379== by 0x10C2C822: ??? ==1008379== by 0x10C2C96F: ??? ==1008379== by 0x165C46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1008379== by 0x165C4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1008379== by 0x1657A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1008379== by 0x1651F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1008379== by 0x120F4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1008379== by 0x1208DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1008379== by 0x10D82D38: PetscInitialize (pinit.c:924) ==1008379== by 0x10BF72DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1008379== by 0x10BF732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1008379== by 0x136AAD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1008379== by 0x13133D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1008379== by 0x1340EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1008379== by 0x133F8C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1008379== by 0x134623: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1008379== by 0x12F765: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==1008379== ==1008379== Open file descriptor 115: ==1008379== ==1008379== ==1008379== Open file descriptor 112: ==1008379== ==1008379== ==1008379== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVanLeeuwen2009WntSwatCellCycleOdeSystem_valgrind.txt ==1008379== ==1008379== ==1008379== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1008379== ==1008379== ==1008379== ==1008379== HEAP SUMMARY: ==1008379== in use at exit: 700,743 bytes in 9,377 blocks ==1008379== total heap usage: 521,726 allocs, 512,349 frees, 1,562,199,591 bytes allocated ==1008379== ==1008379== LEAK SUMMARY: ==1008379== definitely lost: 0 bytes in 0 blocks ==1008379== indirectly lost: 0 bytes in 0 blocks ==1008379== possibly lost: 0 bytes in 0 blocks ==1008379== still reachable: 24 bytes in 2 blocks ==1008379== suppressed: 700,719 bytes in 9,375 blocks ==1008379== Reachable blocks (those to which a pointer was found) are not shown. ==1008379== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1008379== ==1008379== For lists of detected and suppressed errors, rerun with: -s ==1008379== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)