==1066760== Memcheck, a memory error detector ==1066760== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1066760== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1066760== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1066760== Parent PID: 1050807 ==1066760== ==1066760== ==1066760== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1066760== Open file descriptor 12: ==1066760== at 0x111D922D: pipe (pipe.c:29) ==1066760== by 0x1B36607D: ??? ==1066760== by 0x165704CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1066760== by 0x12E35418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1066760== by 0x12DCED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1066760== by 0x11AC5D38: PetscInitialize (pinit.c:924) ==1066760== by 0x109B42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1066760== by 0x109B432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1066760== by 0x23B368: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1066760== by 0x231839: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1066760== by 0x235F6A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1066760== by 0x235E0A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1066760== by 0x2364A1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1066760== by 0x22FC55: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==1066760== ==1066760== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1066760== at 0x111DDBCC: __open_nocancel (open64_nocancel.c:39) ==1066760== by 0x11161C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1066760== by 0x109E9822: ??? ==1066760== by 0x109E996F: ??? ==1066760== by 0x166156DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1066760== by 0x16615938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1066760== by 0x165CB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1066760== by 0x165702DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1066760== by 0x12E35418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1066760== by 0x12DCED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1066760== by 0x11AC5D38: PetscInitialize (pinit.c:924) ==1066760== by 0x109B42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1066760== by 0x109B432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1066760== by 0x23B368: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1066760== by 0x231839: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1066760== by 0x235F6A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1066760== by 0x235E0A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1066760== by 0x2364A1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1066760== by 0x22FC55: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==1066760== ==1066760== Open file descriptor 115: ==1066760== ==1066760== ==1066760== Open file descriptor 112: ==1066760== ==1066760== ==1066760== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==1066760== ==1066760== ==1066760== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1066760== ==1066760== ==1066760== ==1066760== HEAP SUMMARY: ==1066760== in use at exit: 700,704 bytes in 9,374 blocks ==1066760== total heap usage: 6,310,179 allocs, 6,300,805 frees, 2,072,764,734 bytes allocated ==1066760== ==1066760== LEAK SUMMARY: ==1066760== definitely lost: 0 bytes in 0 blocks ==1066760== indirectly lost: 0 bytes in 0 blocks ==1066760== possibly lost: 0 bytes in 0 blocks ==1066760== still reachable: 56 bytes in 3 blocks ==1066760== suppressed: 700,648 bytes in 9,371 blocks ==1066760== Reachable blocks (those to which a pointer was found) are not shown. ==1066760== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1066760== ==1066760== For lists of detected and suppressed errors, rerun with: -s ==1066760== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)