==1052449== Memcheck, a memory error detector ==1052449== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1052449== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1052449== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestGoldbeter1991OdeSystem -malloc_debug -malloc_dump -memory_info ==1052449== Parent PID: 1050807 ==1052449== ==1052449== ==1052449== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1052449== Open file descriptor 12: ==1052449== at 0xEF9322D: pipe (pipe.c:29) ==1052449== by 0x196A407D: ??? ==1052449== by 0x13C464CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1052449== by 0xEBE0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1052449== by 0xEB79D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1052449== by 0xD870D38: PetscInitialize (pinit.c:924) ==1052449== by 0xD6E52DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1052449== by 0xD6E532D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1052449== by 0x124157: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1052449== by 0x11F6A3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1052449== by 0x121BF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1052449== by 0x121AF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1052449== by 0x122103: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1052449== by 0x11DEA5: main (TestGoldbeter1991OdeSystem.cpp:18) ==1052449== ==1052449== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1052449== at 0xEF97BCC: __open_nocancel (open64_nocancel.c:39) ==1052449== by 0xEF1BC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1052449== by 0xD71A822: ??? ==1052449== by 0xD71A96F: ??? ==1052449== by 0x13CEB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1052449== by 0x13CEB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1052449== by 0x13CA1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1052449== by 0x13C462DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1052449== by 0xEBE0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1052449== by 0xEB79D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1052449== by 0xD870D38: PetscInitialize (pinit.c:924) ==1052449== by 0xD6E52DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1052449== by 0xD6E532D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1052449== by 0x124157: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1052449== by 0x11F6A3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1052449== by 0x121BF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1052449== by 0x121AF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1052449== by 0x122103: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1052449== by 0x11DEA5: main (TestGoldbeter1991OdeSystem.cpp:18) ==1052449== ==1052449== Open file descriptor 115: ==1052449== ==1052449== ==1052449== Open file descriptor 112: ==1052449== ==1052449== ==1052449== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGoldbeter1991OdeSystem_valgrind.txt ==1052449== ==1052449== ==1052449== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1052449== ==1052449== ==1052449== ==1052449== HEAP SUMMARY: ==1052449== in use at exit: 700,727 bytes in 9,377 blocks ==1052449== total heap usage: 65,482 allocs, 56,105 frees, 1,355,036,421 bytes allocated ==1052449== ==1052449== LEAK SUMMARY: ==1052449== definitely lost: 0 bytes in 0 blocks ==1052449== indirectly lost: 0 bytes in 0 blocks ==1052449== possibly lost: 0 bytes in 0 blocks ==1052449== still reachable: 24 bytes in 2 blocks ==1052449== suppressed: 700,703 bytes in 9,375 blocks ==1052449== Reachable blocks (those to which a pointer was found) are not shown. ==1052449== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1052449== ==1052449== For lists of detected and suppressed errors, rerun with: -s ==1052449== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)