==1066418== Memcheck, a memory error detector ==1066418== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1066418== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1066418== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningMeshBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==1066418== Parent PID: 1050807 ==1066418== ==1066418== ==1066418== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1066418== Open file descriptor 12: ==1066418== at 0x10CA522D: pipe (pipe.c:29) ==1066418== by 0x196A507D: ??? ==1066418== by 0x14C134CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1066418== by 0x105AD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1066418== by 0x10546D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1066418== by 0xF21DD38: PetscInitialize (pinit.c:924) ==1066418== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1066418== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1066418== by 0x1222CD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1066418== by 0x11D84D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1066418== by 0x11FE3C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1066418== by 0x11FCDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1066418== by 0x120373: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1066418== by 0x11BC75: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==1066418== ==1066418== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1066418== at 0x10CA9BCC: __open_nocancel (open64_nocancel.c:39) ==1066418== by 0x10C2DC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1066418== by 0x104A7822: ??? ==1066418== by 0x104A796F: ??? ==1066418== by 0x14CB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1066418== by 0x14CB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1066418== by 0x14C6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1066418== by 0x14C132DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1066418== by 0x105AD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1066418== by 0x10546D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1066418== by 0xF21DD38: PetscInitialize (pinit.c:924) ==1066418== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1066418== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1066418== by 0x1222CD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1066418== by 0x11D84D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1066418== by 0x11FE3C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1066418== by 0x11FCDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1066418== by 0x120373: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1066418== by 0x11BC75: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==1066418== ==1066418== Open file descriptor 115: ==1066418== ==1066418== ==1066418== Open file descriptor 112: ==1066418== ==1066418== ==1066418== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedSimulationsTutorial_valgrind.txt ==1066418== ==1066418== ==1066418== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1066418== ==1066418== ==1066418== ==1066418== HEAP SUMMARY: ==1066418== in use at exit: 700,759 bytes in 9,378 blocks ==1066418== total heap usage: 3,340,070 allocs, 3,330,692 frees, 2,282,311,793 bytes allocated ==1066418== ==1066418== LEAK SUMMARY: ==1066418== definitely lost: 0 bytes in 0 blocks ==1066418== indirectly lost: 0 bytes in 0 blocks ==1066418== possibly lost: 0 bytes in 0 blocks ==1066418== still reachable: 56 bytes in 3 blocks ==1066418== suppressed: 700,703 bytes in 9,375 blocks ==1066418== Reachable blocks (those to which a pointer was found) are not shown. ==1066418== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1066418== ==1066418== For lists of detected and suppressed errors, rerun with: -s ==1066418== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)