==1354579== Memcheck, a memory error detector ==1354579== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1354579== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1354579== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainWithBathProblem -malloc_debug -malloc_dump -memory_info ==1354579== Parent PID: 1338220 ==1354579== ==1354579== ==1354579== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1354579== Open file descriptor 12: ==1354579== at 0xA8D022D: pipe (pipe.c:29) ==1354579== by 0x13F9407D: ??? ==1354579== by 0xF7984CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1354579== by 0xBFCA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1354579== by 0xBF63D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1354579== by 0xAC5AD38: PetscInitialize (pinit.c:924) ==1354579== by 0xA0D4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1354579== by 0xA0D41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1354579== by 0x14218A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1354579== by 0x13BB8D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1354579== by 0x13F14C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1354579== by 0x13EFEC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1354579== by 0x13F683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1354579== by 0x139E15: main (TestBidomainWithBathProblem.cpp:19) ==1354579== ==1354579== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1354579== at 0xA8D4BCC: __open_nocancel (open64_nocancel.c:39) ==1354579== by 0xA858C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1354579== by 0xA108822: ??? ==1354579== by 0xA10896F: ??? ==1354579== by 0xF83D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1354579== by 0xF83D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1354579== by 0xF7F3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1354579== by 0xF7982DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1354579== by 0xBFCA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1354579== by 0xBF63D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1354579== by 0xAC5AD38: PetscInitialize (pinit.c:924) ==1354579== by 0xA0D4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1354579== by 0xA0D41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1354579== by 0x14218A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1354579== by 0x13BB8D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1354579== by 0x13F14C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1354579== by 0x13EFEC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1354579== by 0x13F683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1354579== by 0x139E15: main (TestBidomainWithBathProblem.cpp:19) ==1354579== ==1354579== Open file descriptor 116: ==1354579== ==1354579== ==1354579== Open file descriptor 112: ==1354579== ==1354579== ==1354579== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainWithBathProblem_valgrind.txt ==1354579== ==1354579== ==1354579== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1354579== ==1354579== ==1354579== ==1354579== HEAP SUMMARY: ==1354579== in use at exit: 701,152 bytes in 9,383 blocks ==1354579== total heap usage: 1,399,751 allocs, 1,390,368 frees, 2,003,646,888 bytes allocated ==1354579== ==1354579== LEAK SUMMARY: ==1354579== definitely lost: 0 bytes in 0 blocks ==1354579== indirectly lost: 0 bytes in 0 blocks ==1354579== possibly lost: 0 bytes in 0 blocks ==1354579== still reachable: 24 bytes in 2 blocks ==1354579== suppressed: 701,128 bytes in 9,381 blocks ==1354579== Reachable blocks (those to which a pointer was found) are not shown. ==1354579== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1354579== ==1354579== For lists of detected and suppressed errors, rerun with: -s ==1354579== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 69 from 34)