==1396284== Memcheck, a memory error detector ==1396284== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1396284== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1396284== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation -malloc_debug -malloc_dump -memory_info ==1396284== Parent PID: 1394331 ==1396284== ==1396284== ==1396284== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1396284== Open file descriptor 12: ==1396284== at 0xEC9322D: pipe (pipe.c:29) ==1396284== by 0x18A1F07D: ??? ==1396284== by 0x140224CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1396284== by 0x108EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1396284== by 0x10888D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1396284== by 0xF57FD38: PetscInitialize (pinit.c:924) ==1396284== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1396284== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1396284== by 0x311532: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1396284== by 0x307AD9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1396284== by 0x30BEE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1396284== by 0x30BD80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1396284== by 0x30C417: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1396284== by 0x305EF5: main (TestOffLatticeSimulation.cpp:19) ==1396284== ==1396284== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1396284== at 0xEC97BCC: __open_nocancel (open64_nocancel.c:39) ==1396284== by 0xEC1BC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1396284== by 0xE4A3822: ??? ==1396284== by 0xE4A396F: ??? ==1396284== by 0x140C76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1396284== by 0x140C7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1396284== by 0x1407D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1396284== by 0x140222DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1396284== by 0x108EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1396284== by 0x10888D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1396284== by 0xF57FD38: PetscInitialize (pinit.c:924) ==1396284== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1396284== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1396284== by 0x311532: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1396284== by 0x307AD9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1396284== by 0x30BEE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1396284== by 0x30BD80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1396284== by 0x30C417: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1396284== by 0x305EF5: main (TestOffLatticeSimulation.cpp:19) ==1396284== ==1396284== Open file descriptor 116: ==1396284== ==1396284== ==1396284== Open file descriptor 112: ==1396284== ==1396284== ==1396284== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation_valgrind.txt ==1396284== ==1396284== ==1396284== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1396284== ==1396284== ==1396284== ==1396284== HEAP SUMMARY: ==1396284== in use at exit: 700,688 bytes in 9,374 blocks ==1396284== total heap usage: 12,851,188 allocs, 12,841,814 frees, 3,876,752,782 bytes allocated ==1396284== ==1396284== LEAK SUMMARY: ==1396284== definitely lost: 0 bytes in 0 blocks ==1396284== indirectly lost: 0 bytes in 0 blocks ==1396284== possibly lost: 0 bytes in 0 blocks ==1396284== still reachable: 56 bytes in 3 blocks ==1396284== suppressed: 700,632 bytes in 9,371 blocks ==1396284== Reachable blocks (those to which a pointer was found) are not shown. ==1396284== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1396284== ==1396284== For lists of detected and suppressed errors, rerun with: -s ==1396284== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)