==1396087== Memcheck, a memory error detector ==1396087== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1396087== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1396087== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsUpdateRules -malloc_debug -malloc_dump -memory_info ==1396087== Parent PID: 1394331 ==1396087== ==1396087== ==1396087== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1396087== Open file descriptor 12: ==1396087== at 0xE79822D: pipe (pipe.c:29) ==1396087== by 0x18A1F07D: ??? ==1396087== by 0x12F6F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1396087== by 0xE0A0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1396087== by 0xE039D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1396087== by 0xCD30D38: PetscInitialize (pinit.c:924) ==1396087== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1396087== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1396087== by 0x133C55: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1396087== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1396087== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1396087== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1396087== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1396087== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==1396087== ==1396087== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1396087== at 0xE79CBCC: __open_nocancel (open64_nocancel.c:39) ==1396087== by 0xE720C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1396087== by 0xCBD8822: ??? ==1396087== by 0xCBD896F: ??? ==1396087== by 0x130146DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1396087== by 0x13014938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1396087== by 0x12FCA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1396087== by 0x12F6F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1396087== by 0xE0A0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1396087== by 0xE039D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1396087== by 0xCD30D38: PetscInitialize (pinit.c:924) ==1396087== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1396087== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1396087== by 0x133C55: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1396087== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1396087== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1396087== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1396087== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1396087== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==1396087== ==1396087== Open file descriptor 116: ==1396087== ==1396087== ==1396087== Open file descriptor 112: ==1396087== ==1396087== ==1396087== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsUpdateRules_valgrind.txt ==1396087== ==1396087== ==1396087== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1396087== ==1396087== ==1396087== ==1396087== HEAP SUMMARY: ==1396087== in use at exit: 700,759 bytes in 9,378 blocks ==1396087== total heap usage: 69,251 allocs, 59,873 frees, 1,355,005,999 bytes allocated ==1396087== ==1396087== LEAK SUMMARY: ==1396087== definitely lost: 0 bytes in 0 blocks ==1396087== indirectly lost: 0 bytes in 0 blocks ==1396087== possibly lost: 0 bytes in 0 blocks ==1396087== still reachable: 56 bytes in 3 blocks ==1396087== suppressed: 700,703 bytes in 9,375 blocks ==1396087== Reachable blocks (those to which a pointer was found) are not shown. ==1396087== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1396087== ==1396087== For lists of detected and suppressed errors, rerun with: -s ==1396087== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)