==1409940== Memcheck, a memory error detector ==1409940== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1409940== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1409940== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVertexCryptBoundaryForce -malloc_debug -malloc_dump -memory_info ==1409940== Parent PID: 1394331 ==1409940== ==1409940== ==1409940== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1409940== Open file descriptor 12: ==1409940== at 0x1042822D: pipe (pipe.c:29) ==1409940== by 0x1A6DF07D: ??? ==1409940== by 0x158F04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1409940== by 0x121AF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1409940== by 0x12148D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1409940== by 0x10E3FD38: PetscInitialize (pinit.c:924) ==1409940== by 0xFD2F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1409940== by 0xFD2F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1409940== by 0x126BFE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1409940== by 0x11FE4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1409940== by 0x1228FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1409940== by 0x12279C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1409940== by 0x122E33: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1409940== by 0x11E275: main (TestVertexCryptBoundaryForce.cpp:19) ==1409940== ==1409940== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1409940== at 0x1042CBCC: __open_nocancel (open64_nocancel.c:39) ==1409940== by 0x103B0C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1409940== by 0xFD63822: ??? ==1409940== by 0xFD6396F: ??? ==1409940== by 0x159956DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1409940== by 0x15995938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1409940== by 0x1594B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1409940== by 0x158F02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1409940== by 0x121AF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1409940== by 0x12148D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1409940== by 0x10E3FD38: PetscInitialize (pinit.c:924) ==1409940== by 0xFD2F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1409940== by 0xFD2F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1409940== by 0x126BFE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1409940== by 0x11FE4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1409940== by 0x1228FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1409940== by 0x12279C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1409940== by 0x122E33: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1409940== by 0x11E275: main (TestVertexCryptBoundaryForce.cpp:19) ==1409940== ==1409940== Open file descriptor 116: ==1409940== ==1409940== ==1409940== Open file descriptor 112: ==1409940== ==1409940== ==1409940== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexCryptBoundaryForce_valgrind.txt ==1409940== ==1409940== ==1409940== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1409940== ==1409940== ==1409940== ==1409940== HEAP SUMMARY: ==1409940== in use at exit: 700,775 bytes in 9,378 blocks ==1409940== total heap usage: 58,237 allocs, 48,859 frees, 1,354,208,125 bytes allocated ==1409940== ==1409940== LEAK SUMMARY: ==1409940== definitely lost: 0 bytes in 0 blocks ==1409940== indirectly lost: 0 bytes in 0 blocks ==1409940== possibly lost: 0 bytes in 0 blocks ==1409940== still reachable: 56 bytes in 3 blocks ==1409940== suppressed: 700,719 bytes in 9,375 blocks ==1409940== Reachable blocks (those to which a pointer was found) are not shown. ==1409940== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1409940== ==1409940== For lists of detected and suppressed errors, rerun with: -s ==1409940== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)