==1452737== Memcheck, a memory error detector ==1452737== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1452737== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1452737== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1452737== Parent PID: 1450466 ==1452737== ==1452737== ==1452737== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1452737== Open file descriptor 12: ==1452737== at 0x1014822D: pipe (pipe.c:29) ==1452737== by 0x18A1F07D: ??? ==1452737== by 0x13F824CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1452737== by 0xF969418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1452737== by 0xF902D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1452737== by 0xE5F9D38: PetscInitialize (pinit.c:924) ==1452737== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1452737== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1452737== by 0x1FFF0F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1452737== by 0x1F9AB9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1452737== by 0x1FD424: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1452737== by 0x1FD2C4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1452737== by 0x1FD95B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1452737== by 0x1F7ED5: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==1452737== ==1452737== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1452737== at 0x1014CBCC: __open_nocancel (open64_nocancel.c:39) ==1452737== by 0x100D0C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1452737== by 0xE4A3822: ??? ==1452737== by 0xE4A396F: ??? ==1452737== by 0x140296DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1452737== by 0x14029938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1452737== by 0x13FDF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1452737== by 0x13F822DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1452737== by 0xF969418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1452737== by 0xF902D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1452737== by 0xE5F9D38: PetscInitialize (pinit.c:924) ==1452737== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1452737== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1452737== by 0x1FFF0F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1452737== by 0x1F9AB9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1452737== by 0x1FD424: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1452737== by 0x1FD2C4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1452737== by 0x1FD95B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1452737== by 0x1F7ED5: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==1452737== ==1452737== Open file descriptor 116: ==1452737== ==1452737== ==1452737== Open file descriptor 112: ==1452737== ==1452737== ==1452737== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithVertexBasedCellPopulation_valgrind.txt ==1452737== ==1452737== ==1452737== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1452737== ==1452737== ==1452737== ==1452737== HEAP SUMMARY: ==1452737== in use at exit: 700,688 bytes in 9,374 blocks ==1452737== total heap usage: 9,749,283 allocs, 9,739,909 frees, 2,617,597,862 bytes allocated ==1452737== ==1452737== LEAK SUMMARY: ==1452737== definitely lost: 0 bytes in 0 blocks ==1452737== indirectly lost: 0 bytes in 0 blocks ==1452737== possibly lost: 0 bytes in 0 blocks ==1452737== still reachable: 56 bytes in 3 blocks ==1452737== suppressed: 700,632 bytes in 9,371 blocks ==1452737== Reachable blocks (those to which a pointer was found) are not shown. ==1452737== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1452737== ==1452737== For lists of detected and suppressed errors, rerun with: -s ==1452737== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)