==1521617== Memcheck, a memory error detector ==1521617== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1521617== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1521617== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellKillerTutorial -malloc_debug -malloc_dump -memory_info ==1521617== Parent PID: 1506540 ==1521617== ==1521617== ==1521617== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1521617== Open file descriptor 12: ==1521617== at 0x1014822D: pipe (pipe.c:29) ==1521617== by 0x18A1F07D: ??? ==1521617== by 0x13F824CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1521617== by 0xF969418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1521617== by 0xF902D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1521617== by 0xE5F9D38: PetscInitialize (pinit.c:924) ==1521617== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1521617== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1521617== by 0x141179: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1521617== by 0x13BF3F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1521617== by 0x13E6FA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1521617== by 0x13E5F5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1521617== by 0x13EC09: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1521617== by 0x13A735: main (TestCreatingAndUsingANewCellKillerTutorial.cpp:18) ==1521617== ==1521617== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1521617== at 0x1014CBCC: __open_nocancel (open64_nocancel.c:39) ==1521617== by 0x100D0C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1521617== by 0xE4A3822: ??? ==1521617== by 0xE4A396F: ??? ==1521617== by 0x140296DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1521617== by 0x14029938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1521617== by 0x13FDF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1521617== by 0x13F822DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1521617== by 0xF969418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1521617== by 0xF902D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1521617== by 0xE5F9D38: PetscInitialize (pinit.c:924) ==1521617== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1521617== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1521617== by 0x141179: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1521617== by 0x13BF3F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1521617== by 0x13E6FA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1521617== by 0x13E5F5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1521617== by 0x13EC09: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1521617== by 0x13A735: main (TestCreatingAndUsingANewCellKillerTutorial.cpp:18) ==1521617== ==1521617== Open file descriptor 116: ==1521617== ==1521617== ==1521617== Open file descriptor 112: ==1521617== ==1521617== ==1521617== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellKillerTutorial_valgrind.txt ==1521617== ==1521617== ==1521617== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1521617== ==1521617== ==1521617== ==1521617== HEAP SUMMARY: ==1521617== in use at exit: 700,688 bytes in 9,374 blocks ==1521617== total heap usage: 2,719,281 allocs, 2,709,907 frees, 1,522,906,632 bytes allocated ==1521617== ==1521617== LEAK SUMMARY: ==1521617== definitely lost: 0 bytes in 0 blocks ==1521617== indirectly lost: 0 bytes in 0 blocks ==1521617== possibly lost: 0 bytes in 0 blocks ==1521617== still reachable: 56 bytes in 3 blocks ==1521617== suppressed: 700,632 bytes in 9,371 blocks ==1521617== Reachable blocks (those to which a pointer was found) are not shown. ==1521617== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1521617== ==1521617== For lists of detected and suppressed errors, rerun with: -s ==1521617== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)