==1559931== Memcheck, a memory error detector ==1559931== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1559931== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1559931== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCheckpointing -malloc_debug -malloc_dump -memory_info ==1559931== Parent PID: 1541673 ==1559931== ==1559931== ==1559931== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1559931== Open file descriptor 12: ==1559931== at 0xA43022D: pipe (pipe.c:29) ==1559931== by 0x13F9407D: ??? ==1559931== by 0xF7984CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1559931== by 0xBB28418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1559931== by 0xBAC1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1559931== by 0xA7B8D38: PetscInitialize (pinit.c:924) ==1559931== by 0x9D1B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1559931== by 0x9D1B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1559931== by 0x1239FA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1559931== by 0x11E4F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1559931== by 0x120D74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1559931== by 0x120C6F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1559931== by 0x121283: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1559931== by 0x11CCF5: main (TestCheckpointing.cpp:18) ==1559931== ==1559931== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1559931== at 0xA434BCC: __open_nocancel (open64_nocancel.c:39) ==1559931== by 0xA3B8C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1559931== by 0x9D4F822: ??? ==1559931== by 0x9D4F96F: ??? ==1559931== by 0xF83D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1559931== by 0xF83D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1559931== by 0xF7F3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1559931== by 0xF7982DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1559931== by 0xBB28418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1559931== by 0xBAC1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1559931== by 0xA7B8D38: PetscInitialize (pinit.c:924) ==1559931== by 0x9D1B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1559931== by 0x9D1B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1559931== by 0x1239FA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1559931== by 0x11E4F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1559931== by 0x120D74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1559931== by 0x120C6F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1559931== by 0x121283: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1559931== by 0x11CCF5: main (TestCheckpointing.cpp:18) ==1559931== ==1559931== Open file descriptor 116: ==1559931== ==1559931== ==1559931== Open file descriptor 112: ==1559931== ==1559931== ==1559931== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCheckpointing_valgrind.txt ==1559931== ==1559931== ==1559931== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1559931== ==1559931== ==1559931== ==1559931== HEAP SUMMARY: ==1559931== in use at exit: 701,223 bytes in 9,387 blocks ==1559931== total heap usage: 837,282 allocs, 827,895 frees, 1,458,866,888 bytes allocated ==1559931== ==1559931== LEAK SUMMARY: ==1559931== definitely lost: 0 bytes in 0 blocks ==1559931== indirectly lost: 0 bytes in 0 blocks ==1559931== possibly lost: 0 bytes in 0 blocks ==1559931== still reachable: 24 bytes in 2 blocks ==1559931== suppressed: 701,199 bytes in 9,385 blocks ==1559931== Reachable blocks (those to which a pointer was found) are not shown. ==1559931== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1559931== ==1559931== For lists of detected and suppressed errors, rerun with: -s ==1559931== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 63 from 37)