==1635011== Memcheck, a memory error detector ==1635011== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1635011== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1635011== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningCryptSimulationsWithMutationsTutorial -malloc_debug -malloc_dump -memory_info ==1635011== Parent PID: 1618946 ==1635011== ==1635011== ==1635011== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1635011== Open file descriptor 12: ==1635011== at 0x118DF22D: pipe (pipe.c:29) ==1635011== by 0x1A6DF07D: ??? ==1635011== by 0x158434CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1635011== by 0x111E7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1635011== by 0x11180D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1635011== by 0xFE57D38: PetscInitialize (pinit.c:924) ==1635011== by 0xFD2F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1635011== by 0xFD2F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1635011== by 0x123E95: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1635011== by 0x11F713: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1635011== by 0x12197C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1635011== by 0x121878: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1635011== by 0x121E8B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1635011== by 0x11DF15: main (TestRunningCryptSimulationsWithMutationsTutorial.cpp:18) ==1635011== ==1635011== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1635011== at 0x118E3BCC: __open_nocancel (open64_nocancel.c:39) ==1635011== by 0x11867C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1635011== by 0x110E1822: ??? ==1635011== by 0x110E196F: ??? ==1635011== by 0x158E86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1635011== by 0x158E8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1635011== by 0x1589E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1635011== by 0x158432DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1635011== by 0x111E7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1635011== by 0x11180D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1635011== by 0xFE57D38: PetscInitialize (pinit.c:924) ==1635011== by 0xFD2F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1635011== by 0xFD2F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1635011== by 0x123E95: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1635011== by 0x11F713: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1635011== by 0x12197C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1635011== by 0x121878: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1635011== by 0x121E8B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1635011== by 0x11DF15: main (TestRunningCryptSimulationsWithMutationsTutorial.cpp:18) ==1635011== ==1635011== Open file descriptor 116: ==1635011== ==1635011== ==1635011== Open file descriptor 112: ==1635011== ==1635011== ==1635011== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningCryptSimulationsWithMutationsTutorial_valgrind.txt ==1635011== ==1635011== ==1635011== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1635011== ==1635011== ==1635011== ==1635011== HEAP SUMMARY: ==1635011== in use at exit: 700,704 bytes in 9,374 blocks ==1635011== total heap usage: 16,187,962 allocs, 16,178,588 frees, 2,844,996,090 bytes allocated ==1635011== ==1635011== LEAK SUMMARY: ==1635011== definitely lost: 0 bytes in 0 blocks ==1635011== indirectly lost: 0 bytes in 0 blocks ==1635011== possibly lost: 0 bytes in 0 blocks ==1635011== still reachable: 56 bytes in 3 blocks ==1635011== suppressed: 700,648 bytes in 9,371 blocks ==1635011== Reachable blocks (those to which a pointer was found) are not shown. ==1635011== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1635011== ==1635011== For lists of detected and suppressed errors, rerun with: -s ==1635011== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)