==1753289== Memcheck, a memory error detector ==1753289== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1753289== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1753289== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1753289== Parent PID: 1751731 ==1753289== ==1753289== ==1753289== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1753289== Open file descriptor 12: ==1753289== at 0xEBAA22D: pipe (pipe.c:29) ==1753289== by 0x18A1F07D: ??? ==1753289== by 0x140224CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1753289== by 0x10808418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1753289== by 0x107A1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1753289== by 0xF496D38: PetscInitialize (pinit.c:924) ==1753289== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1753289== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1753289== by 0x16556C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1753289== by 0x15DBC9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1753289== by 0x160D98: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1753289== by 0x160C38: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1753289== by 0x1612CF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1753289== by 0x15BFE5: main (TestCaBasedCellPopulation.cpp:19) ==1753289== ==1753289== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1753289== at 0xEBAEBCC: __open_nocancel (open64_nocancel.c:39) ==1753289== by 0xEB32C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1753289== by 0xE4A3822: ??? ==1753289== by 0xE4A396F: ??? ==1753289== by 0x140C76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1753289== by 0x140C7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1753289== by 0x1407D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1753289== by 0x140222DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1753289== by 0x10808418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1753289== by 0x107A1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1753289== by 0xF496D38: PetscInitialize (pinit.c:924) ==1753289== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1753289== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1753289== by 0x16556C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1753289== by 0x15DBC9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1753289== by 0x160D98: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1753289== by 0x160C38: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1753289== by 0x1612CF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1753289== by 0x15BFE5: main (TestCaBasedCellPopulation.cpp:19) ==1753289== ==1753289== Open file descriptor 116: ==1753289== ==1753289== ==1753289== Open file descriptor 112: ==1753289== ==1753289== ==1753289== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaBasedCellPopulation_valgrind.txt ==1753289== ==1753289== ==1753289== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1753289== ==1753289== ==1753289== ==1753289== HEAP SUMMARY: ==1753289== in use at exit: 700,759 bytes in 9,378 blocks ==1753289== total heap usage: 77,577 allocs, 68,199 frees, 1,362,413,549 bytes allocated ==1753289== ==1753289== LEAK SUMMARY: ==1753289== definitely lost: 0 bytes in 0 blocks ==1753289== indirectly lost: 0 bytes in 0 blocks ==1753289== possibly lost: 0 bytes in 0 blocks ==1753289== still reachable: 56 bytes in 3 blocks ==1753289== suppressed: 700,703 bytes in 9,375 blocks ==1753289== Reachable blocks (those to which a pointer was found) are not shown. ==1753289== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1753289== ==1753289== For lists of detected and suppressed errors, rerun with: -s ==1753289== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)