==1767474== Memcheck, a memory error detector ==1767474== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1767474== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1767474== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOffLatticeCryptProjectionSimulation -malloc_debug -malloc_dump -memory_info ==1767474== Parent PID: 1751731 ==1767474== ==1767474== ==1767474== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1767474== Open file descriptor 12: ==1767474== at 0x119C622D: pipe (pipe.c:29) ==1767474== by 0x1A6DF07D: ??? ==1767474== by 0x158434CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1767474== by 0x111E7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1767474== by 0x11180D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1767474== by 0xFE57D38: PetscInitialize (pinit.c:924) ==1767474== by 0xFD2F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1767474== by 0xFD2F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1767474== by 0x135AC5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1767474== by 0x12F30D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1767474== by 0x131D16: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1767474== by 0x131BB6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1767474== by 0x13224D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1767474== by 0x12D735: main (TestOffLatticeCryptProjectionSimulation.cpp:19) ==1767474== ==1767474== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1767474== at 0x119CABCC: __open_nocancel (open64_nocancel.c:39) ==1767474== by 0x1194EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1767474== by 0x110E1822: ??? ==1767474== by 0x110E196F: ??? ==1767474== by 0x158E86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1767474== by 0x158E8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1767474== by 0x1589E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1767474== by 0x158432DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1767474== by 0x111E7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1767474== by 0x11180D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1767474== by 0xFE57D38: PetscInitialize (pinit.c:924) ==1767474== by 0xFD2F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1767474== by 0xFD2F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1767474== by 0x135AC5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1767474== by 0x12F30D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1767474== by 0x131D16: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1767474== by 0x131BB6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1767474== by 0x13224D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1767474== by 0x12D735: main (TestOffLatticeCryptProjectionSimulation.cpp:19) ==1767474== ==1767474== Open file descriptor 116: ==1767474== ==1767474== ==1767474== Open file descriptor 112: ==1767474== ==1767474== ==1767474== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeCryptProjectionSimulation_valgrind.txt ==1767474== ==1767474== ==1767474== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1767474== ==1767474== ==1767474== ==1767474== HEAP SUMMARY: ==1767474== in use at exit: 700,775 bytes in 9,378 blocks ==1767474== total heap usage: 1,346,296 allocs, 1,336,918 frees, 1,468,274,465 bytes allocated ==1767474== ==1767474== LEAK SUMMARY: ==1767474== definitely lost: 0 bytes in 0 blocks ==1767474== indirectly lost: 0 bytes in 0 blocks ==1767474== possibly lost: 0 bytes in 0 blocks ==1767474== still reachable: 56 bytes in 3 blocks ==1767474== suppressed: 700,719 bytes in 9,375 blocks ==1767474== Reachable blocks (those to which a pointer was found) are not shown. ==1767474== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1767474== ==1767474== For lists of detected and suppressed errors, rerun with: -s ==1767474== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)