==1803237== Memcheck, a memory error detector ==1803237== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1803237== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1803237== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningImmersedBoundarySimulationsTutorial -malloc_debug -malloc_dump -memory_info ==1803237== Parent PID: 1787640 ==1803237== ==1803237== ==1803237== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1803237== Open file descriptor 12: ==1803237== at 0x10CA522D: pipe (pipe.c:29) ==1803237== by 0x196A507D: ??? ==1803237== by 0x14C134CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1803237== by 0x105AD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1803237== by 0x10546D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1803237== by 0xF21DD38: PetscInitialize (pinit.c:924) ==1803237== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1803237== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1803237== by 0x121D4D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1803237== by 0x11D533: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1803237== by 0x11F8F6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1803237== by 0x11F7F1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1803237== by 0x11FE05: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1803237== by 0x11BD35: main (TestRunningImmersedBoundarySimulationsTutorial.cpp:18) ==1803237== ==1803237== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1803237== at 0x10CA9BCC: __open_nocancel (open64_nocancel.c:39) ==1803237== by 0x10C2DC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1803237== by 0x104A7822: ??? ==1803237== by 0x104A796F: ??? ==1803237== by 0x14CB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1803237== by 0x14CB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1803237== by 0x14C6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1803237== by 0x14C132DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1803237== by 0x105AD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1803237== by 0x10546D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1803237== by 0xF21DD38: PetscInitialize (pinit.c:924) ==1803237== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1803237== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1803237== by 0x121D4D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1803237== by 0x11D533: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1803237== by 0x11F8F6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1803237== by 0x11F7F1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1803237== by 0x11FE05: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1803237== by 0x11BD35: main (TestRunningImmersedBoundarySimulationsTutorial.cpp:18) ==1803237== ==1803237== Open file descriptor 116: ==1803237== ==1803237== ==1803237== Open file descriptor 112: ==1803237== ==1803237== ==1803237== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningImmersedBoundarySimulationsTutorial_valgrind.txt ==1803237== ==1803237== ==1803237== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1803237== ==1803237== ==1803237== ==1803237== HEAP SUMMARY: ==1803237== in use at exit: 700,688 bytes in 9,374 blocks ==1803237== total heap usage: 657,214 allocs, 647,840 frees, 1,527,948,042 bytes allocated ==1803237== ==1803237== LEAK SUMMARY: ==1803237== definitely lost: 0 bytes in 0 blocks ==1803237== indirectly lost: 0 bytes in 0 blocks ==1803237== possibly lost: 0 bytes in 0 blocks ==1803237== still reachable: 56 bytes in 3 blocks ==1803237== suppressed: 700,632 bytes in 9,371 blocks ==1803237== Reachable blocks (those to which a pointer was found) are not shown. ==1803237== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1803237== ==1803237== For lists of detected and suppressed errors, rerun with: -s ==1803237== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)