==1864658== Memcheck, a memory error detector ==1864658== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1864658== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1864658== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHdf5ToVisualizerConverters -malloc_debug -malloc_dump -memory_info ==1864658== Parent PID: 1846246 ==1864658== ==1864658== ==1864658== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1864658== Open file descriptor 12: ==1864658== at 0xA8A122D: pipe (pipe.c:29) ==1864658== by 0x1431D07D: ??? ==1864658== by 0xFB254CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1864658== by 0xBF99418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1864658== by 0xBF32D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1864658== by 0xAC29D38: PetscInitialize (pinit.c:924) ==1864658== by 0xA18B2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1864658== by 0xA18B32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1864658== by 0x124324: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1864658== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1864658== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1864658== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1864658== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1864658== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==1864658== ==1864658== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1864658== at 0xA8A5BCC: __open_nocancel (open64_nocancel.c:39) ==1864658== by 0xA829C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1864658== by 0xA1C0822: ??? ==1864658== by 0xA1C096F: ??? ==1864658== by 0xFBCA6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1864658== by 0xFBCA938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1864658== by 0xFB80922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1864658== by 0xFB252DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1864658== by 0xBF99418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1864658== by 0xBF32D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1864658== by 0xAC29D38: PetscInitialize (pinit.c:924) ==1864658== by 0xA18B2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1864658== by 0xA18B32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1864658== by 0x124324: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1864658== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1864658== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1864658== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1864658== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1864658== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==1864658== ==1864658== Open file descriptor 116: ==1864658== ==1864658== ==1864658== Open file descriptor 112: ==1864658== ==1864658== ==1864658== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5ToVisualizerConverters_valgrind.txt ==1864658== ==1864658== ==1864658== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1864658== ==1864658== ==1864658== ==1864658== HEAP SUMMARY: ==1864658== in use at exit: 700,743 bytes in 9,377 blocks ==1864658== total heap usage: 125,305 allocs, 115,928 frees, 1,382,167,616 bytes allocated ==1864658== ==1864658== LEAK SUMMARY: ==1864658== definitely lost: 0 bytes in 0 blocks ==1864658== indirectly lost: 0 bytes in 0 blocks ==1864658== possibly lost: 0 bytes in 0 blocks ==1864658== still reachable: 24 bytes in 2 blocks ==1864658== suppressed: 700,719 bytes in 9,375 blocks ==1864658== Reachable blocks (those to which a pointer was found) are not shown. ==1864658== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1864658== ==1864658== For lists of detected and suppressed errors, rerun with: -s ==1864658== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)