==1862079== Memcheck, a memory error detector ==1862079== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1862079== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1862079== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOdeBasedCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==1862079== Parent PID: 1846246 ==1862079== ==1862079== ==1862079== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1862079== Open file descriptor 12: ==1862079== at 0x10B9822D: pipe (pipe.c:29) ==1862079== by 0x1B36707D: ??? ==1862079== by 0x155084CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1862079== by 0x104A0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1862079== by 0x10439D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1862079== by 0xF130D38: PetscInitialize (pinit.c:924) ==1862079== by 0xEFA52DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1862079== by 0xEFA532D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1862079== by 0x192669: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1862079== by 0x18A60B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1862079== by 0x18DC08: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1862079== by 0x18DAA8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1862079== by 0x18E13F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1862079== by 0x186F35: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==1862079== ==1862079== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1862079== at 0x10B9CBCC: __open_nocancel (open64_nocancel.c:39) ==1862079== by 0x10B20C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1862079== by 0xEFDA822: ??? ==1862079== by 0xEFDA96F: ??? ==1862079== by 0x155AD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1862079== by 0x155AD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1862079== by 0x15563922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1862079== by 0x155082DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1862079== by 0x104A0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1862079== by 0x10439D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1862079== by 0xF130D38: PetscInitialize (pinit.c:924) ==1862079== by 0xEFA52DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1862079== by 0xEFA532D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1862079== by 0x192669: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1862079== by 0x18A60B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1862079== by 0x18DC08: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1862079== by 0x18DAA8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1862079== by 0x18E13F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1862079== by 0x186F35: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==1862079== ==1862079== Open file descriptor 116: ==1862079== ==1862079== ==1862079== Open file descriptor 112: ==1862079== ==1862079== ==1862079== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModelsForCrypt_valgrind.txt ==1862079== ==1862079== ==1862079== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1862079== ==1862079== ==1862079== ==1862079== HEAP SUMMARY: ==1862079== in use at exit: 700,839 bytes in 9,379 blocks ==1862079== total heap usage: 864,278 allocs, 854,899 frees, 1,475,989,127 bytes allocated ==1862079== ==1862079== LEAK SUMMARY: ==1862079== definitely lost: 0 bytes in 0 blocks ==1862079== indirectly lost: 0 bytes in 0 blocks ==1862079== possibly lost: 0 bytes in 0 blocks ==1862079== still reachable: 120 bytes in 4 blocks ==1862079== suppressed: 700,719 bytes in 9,375 blocks ==1862079== Reachable blocks (those to which a pointer was found) are not shown. ==1862079== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1862079== ==1862079== For lists of detected and suppressed errors, rerun with: -s ==1862079== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)