==1848500== Memcheck, a memory error detector ==1848500== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1848500== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1848500== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation -malloc_debug -malloc_dump -memory_info ==1848500== Parent PID: 1846246 ==1848500== ==1848500== ==1848500== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1848500== Open file descriptor 12: ==1848500== at 0xF91922D: pipe (pipe.c:29) ==1848500== by 0x196A507D: ??? ==1848500== by 0x14CB14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1848500== by 0x11575418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1848500== by 0x1150ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1848500== by 0x10205D38: PetscInitialize (pinit.c:924) ==1848500== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1848500== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1848500== by 0x311532: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1848500== by 0x307AD9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1848500== by 0x30BEE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1848500== by 0x30BD80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1848500== by 0x30C417: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1848500== by 0x305EF5: main (TestOffLatticeSimulation.cpp:19) ==1848500== ==1848500== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1848500== at 0xF91DBCC: __open_nocancel (open64_nocancel.c:39) ==1848500== by 0xF8A1C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1848500== by 0xF129822: ??? ==1848500== by 0xF12996F: ??? ==1848500== by 0x14D566DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1848500== by 0x14D56938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1848500== by 0x14D0C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1848500== by 0x14CB12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1848500== by 0x11575418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1848500== by 0x1150ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1848500== by 0x10205D38: PetscInitialize (pinit.c:924) ==1848500== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1848500== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1848500== by 0x311532: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1848500== by 0x307AD9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1848500== by 0x30BEE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1848500== by 0x30BD80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1848500== by 0x30C417: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1848500== by 0x305EF5: main (TestOffLatticeSimulation.cpp:19) ==1848500== ==1848500== Open file descriptor 116: ==1848500== ==1848500== ==1848500== Open file descriptor 112: ==1848500== ==1848500== ==1848500== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation_valgrind.txt ==1848500== ==1848500== ==1848500== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1848500== ==1848500== ==1848500== ==1848500== HEAP SUMMARY: ==1848500== in use at exit: 700,688 bytes in 9,374 blocks ==1848500== total heap usage: 12,851,725 allocs, 12,842,351 frees, 3,876,801,055 bytes allocated ==1848500== ==1848500== LEAK SUMMARY: ==1848500== definitely lost: 0 bytes in 0 blocks ==1848500== indirectly lost: 0 bytes in 0 blocks ==1848500== possibly lost: 0 bytes in 0 blocks ==1848500== still reachable: 56 bytes in 3 blocks ==1848500== suppressed: 700,632 bytes in 9,371 blocks ==1848500== Reachable blocks (those to which a pointer was found) are not shown. ==1848500== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1848500== ==1848500== For lists of detected and suppressed errors, rerun with: -s ==1848500== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)