==1861979== Memcheck, a memory error detector ==1861979== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1861979== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1861979== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningPottsBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==1861979== Parent PID: 1846246 ==1861979== ==1861979== ==1861979== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1861979== Open file descriptor 12: ==1861979== at 0xDB9C22D: pipe (pipe.c:29) ==1861979== by 0x196A407D: ??? ==1861979== by 0x14CA94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1861979== by 0x1148E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1861979== by 0x11427D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1861979== by 0x1011ED38: PetscInitialize (pinit.c:924) ==1861979== by 0xD4A02DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1861979== by 0xD4A032D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1861979== by 0x124714: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1861979== by 0x11FC2D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1861979== by 0x12224E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1861979== by 0x1220EE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1861979== by 0x122785: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1861979== by 0x11E055: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==1861979== ==1861979== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1861979== at 0xDBA0BCC: __open_nocancel (open64_nocancel.c:39) ==1861979== by 0xDB24C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1861979== by 0xD4D5822: ??? ==1861979== by 0xD4D596F: ??? ==1861979== by 0x14D4E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1861979== by 0x14D4E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1861979== by 0x14D04922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1861979== by 0x14CA92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1861979== by 0x1148E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1861979== by 0x11427D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1861979== by 0x1011ED38: PetscInitialize (pinit.c:924) ==1861979== by 0xD4A02DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1861979== by 0xD4A032D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1861979== by 0x124714: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1861979== by 0x11FC2D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1861979== by 0x12224E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1861979== by 0x1220EE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1861979== by 0x122785: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1861979== by 0x11E055: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==1861979== ==1861979== Open file descriptor 116: ==1861979== ==1861979== ==1861979== Open file descriptor 112: ==1861979== ==1861979== ==1861979== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningPottsBasedSimulationsTutorial_valgrind.txt ==1861979== ==1861979== ==1861979== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1861979== ==1861979== ==1861979== ==1861979== HEAP SUMMARY: ==1861979== in use at exit: 700,688 bytes in 9,374 blocks ==1861979== total heap usage: 40,689,152 allocs, 40,679,778 frees, 3,845,594,356 bytes allocated ==1861979== ==1861979== LEAK SUMMARY: ==1861979== definitely lost: 0 bytes in 0 blocks ==1861979== indirectly lost: 0 bytes in 0 blocks ==1861979== possibly lost: 0 bytes in 0 blocks ==1861979== still reachable: 56 bytes in 3 blocks ==1861979== suppressed: 700,632 bytes in 9,371 blocks ==1861979== Reachable blocks (those to which a pointer was found) are not shown. ==1861979== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1861979== ==1861979== For lists of detected and suppressed errors, rerun with: -s ==1861979== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)