==1906526== Memcheck, a memory error detector ==1906526== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1906526== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1906526== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/Test2dVertexBasedSimulationWithSrnModels -malloc_debug -malloc_dump -memory_info ==1906526== Parent PID: 1904560 ==1906526== ==1906526== ==1906526== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1906526== Open file descriptor 12: ==1906526== at 0xF7EE22D: pipe (pipe.c:29) ==1906526== by 0x196A407D: ??? ==1906526== by 0x14CB14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1906526== by 0x1148E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1906526== by 0x11427D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1906526== by 0x1011ED38: PetscInitialize (pinit.c:924) ==1906526== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1906526== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1906526== by 0x1221C2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1906526== by 0x11D90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1906526== by 0x11FCFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1906526== by 0x11FB9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1906526== by 0x120233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1906526== by 0x11BD35: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==1906526== ==1906526== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1906526== at 0xF7F2BCC: __open_nocancel (open64_nocancel.c:39) ==1906526== by 0xF776C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1906526== by 0xF129822: ??? ==1906526== by 0xF12996F: ??? ==1906526== by 0x14D566DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1906526== by 0x14D56938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1906526== by 0x14D0C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1906526== by 0x14CB12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1906526== by 0x1148E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1906526== by 0x11427D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1906526== by 0x1011ED38: PetscInitialize (pinit.c:924) ==1906526== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1906526== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1906526== by 0x1221C2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1906526== by 0x11D90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1906526== by 0x11FCFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1906526== by 0x11FB9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1906526== by 0x120233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1906526== by 0x11BD35: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==1906526== ==1906526== Open file descriptor 116: ==1906526== ==1906526== ==1906526== Open file descriptor 112: ==1906526== ==1906526== ==1906526== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test2dVertexBasedSimulationWithSrnModels_valgrind.txt ==1906526== ==1906526== ==1906526== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1906526== ==1906526== ==1906526== ==1906526== HEAP SUMMARY: ==1906526== in use at exit: 700,759 bytes in 9,378 blocks ==1906526== total heap usage: 1,127,115 allocs, 1,117,737 frees, 1,431,072,268 bytes allocated ==1906526== ==1906526== LEAK SUMMARY: ==1906526== definitely lost: 0 bytes in 0 blocks ==1906526== indirectly lost: 0 bytes in 0 blocks ==1906526== possibly lost: 0 bytes in 0 blocks ==1906526== still reachable: 56 bytes in 3 blocks ==1906526== suppressed: 700,703 bytes in 9,375 blocks ==1906526== Reachable blocks (those to which a pointer was found) are not shown. ==1906526== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1906526== ==1906526== For lists of detected and suppressed errors, rerun with: -s ==1906526== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)