==1907032== Memcheck, a memory error detector ==1907032== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1907032== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1907032== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==1907032== Parent PID: 1904560 ==1907032== ==1907032== ==1907032== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1907032== Open file descriptor 12: ==1907032== at 0xFCB622D: pipe (pipe.c:29) ==1907032== by 0x196A407D: ??? ==1907032== by 0x14CA74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1907032== by 0x11575418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1907032== by 0x1150ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1907032== by 0x10205D38: PetscInitialize (pinit.c:924) ==1907032== by 0xF4912DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1907032== by 0xF49132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1907032== by 0x226536: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1907032== by 0x21FB71: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1907032== by 0x2236DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1907032== by 0x22357C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1907032== by 0x223C13: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1907032== by 0x21DF55: main (TestOffLatticeSimulationWithPdes.cpp:19) ==1907032== ==1907032== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1907032== at 0xFCBABCC: __open_nocancel (open64_nocancel.c:39) ==1907032== by 0xFC3EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1907032== by 0xF4C6822: ??? ==1907032== by 0xF4C696F: ??? ==1907032== by 0x14D4C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1907032== by 0x14D4C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1907032== by 0x14D02922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1907032== by 0x14CA72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1907032== by 0x11575418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1907032== by 0x1150ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1907032== by 0x10205D38: PetscInitialize (pinit.c:924) ==1907032== by 0xF4912DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1907032== by 0xF49132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1907032== by 0x226536: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1907032== by 0x21FB71: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1907032== by 0x2236DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1907032== by 0x22357C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1907032== by 0x223C13: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1907032== by 0x21DF55: main (TestOffLatticeSimulationWithPdes.cpp:19) ==1907032== ==1907032== Open file descriptor 116: ==1907032== ==1907032== ==1907032== Open file descriptor 112: ==1907032== ==1907032== ==1907032== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==1907032== ==1907032== ==1907032== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1907032== ==1907032== ==1907032== ==1907032== HEAP SUMMARY: ==1907032== in use at exit: 700,688 bytes in 9,374 blocks ==1907032== total heap usage: 7,488,882 allocs, 7,479,508 frees, 2,658,290,591 bytes allocated ==1907032== ==1907032== LEAK SUMMARY: ==1907032== definitely lost: 0 bytes in 0 blocks ==1907032== indirectly lost: 0 bytes in 0 blocks ==1907032== possibly lost: 0 bytes in 0 blocks ==1907032== still reachable: 56 bytes in 3 blocks ==1907032== suppressed: 700,632 bytes in 9,371 blocks ==1907032== Reachable blocks (those to which a pointer was found) are not shown. ==1907032== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1907032== ==1907032== For lists of detected and suppressed errors, rerun with: -s ==1907032== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)