==2017829== Memcheck, a memory error detector ==2017829== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2017829== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2017829== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/Test1dMonodomainShannonCvodeBenchmarks -malloc_debug -malloc_dump -memory_info ==2017829== Parent PID: 1999474 ==2017829== ==2017829== ==2017829== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2017829== Open file descriptor 12: ==2017829== at 0xA7BA22D: pipe (pipe.c:29) ==2017829== by 0x1431D07D: ??? ==2017829== by 0xFB214CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2017829== by 0xBEB2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2017829== by 0xBE4BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2017829== by 0xAB42D38: PetscInitialize (pinit.c:924) ==2017829== by 0xA0A42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2017829== by 0xA0A432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2017829== by 0x1220FC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2017829== by 0x11D313: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2017829== by 0x11F5E6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2017829== by 0x11F4E2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2017829== by 0x11FAF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2017829== by 0x11BB15: main (Test1dMonodomainShannonCvodeBenchmarks.cpp:18) ==2017829== ==2017829== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2017829== at 0xA7BEBCC: __open_nocancel (open64_nocancel.c:39) ==2017829== by 0xA742C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2017829== by 0xA0D9822: ??? ==2017829== by 0xA0D996F: ??? ==2017829== by 0xFBC66DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2017829== by 0xFBC6938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2017829== by 0xFB7C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2017829== by 0xFB212DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2017829== by 0xBEB2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2017829== by 0xBE4BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2017829== by 0xAB42D38: PetscInitialize (pinit.c:924) ==2017829== by 0xA0A42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2017829== by 0xA0A432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2017829== by 0x1220FC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2017829== by 0x11D313: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2017829== by 0x11F5E6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2017829== by 0x11F4E2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2017829== by 0x11FAF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2017829== by 0x11BB15: main (Test1dMonodomainShannonCvodeBenchmarks.cpp:18) ==2017829== ==2017829== Open file descriptor 116: ==2017829== ==2017829== ==2017829== Open file descriptor 112: ==2017829== ==2017829== ==2017829== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test1dMonodomainShannonCvodeBenchmarks_valgrind.txt ==2017829== ==2017829== ==2017829== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2017829== ==2017829== ==2017829== ==2017829== HEAP SUMMARY: ==2017829== in use at exit: 701,152 bytes in 9,383 blocks ==2017829== total heap usage: 321,897 allocs, 312,514 frees, 1,413,158,047 bytes allocated ==2017829== ==2017829== LEAK SUMMARY: ==2017829== definitely lost: 0 bytes in 0 blocks ==2017829== indirectly lost: 0 bytes in 0 blocks ==2017829== possibly lost: 0 bytes in 0 blocks ==2017829== still reachable: 24 bytes in 2 blocks ==2017829== suppressed: 701,128 bytes in 9,381 blocks ==2017829== Reachable blocks (those to which a pointer was found) are not shown. ==2017829== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2017829== ==2017829== For lists of detected and suppressed errors, rerun with: -s ==2017829== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 40 from 32)