==2016050== Memcheck, a memory error detector ==2016050== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2016050== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2016050== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainDistributedMesh -malloc_debug -malloc_dump -memory_info ==2016050== Parent PID: 1999474 ==2016050== ==2016050== ==2016050== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2016050== Open file descriptor 12: ==2016050== at 0xBBFC22D: pipe (pipe.c:29) ==2016050== by 0x1431D07D: ??? ==2016050== by 0xFAD44CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2016050== by 0xB4EA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2016050== by 0xB483D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2016050== by 0xA15AD38: PetscInitialize (pinit.c:924) ==2016050== by 0xA0312DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2016050== by 0xA03132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2016050== by 0x12A9B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2016050== by 0x125733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2016050== by 0x127D56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2016050== by 0x127C52: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2016050== by 0x128265: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2016050== by 0x123F35: main (TestBidomainDistributedMesh.cpp:18) ==2016050== ==2016050== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2016050== at 0xBC00BCC: __open_nocancel (open64_nocancel.c:39) ==2016050== by 0xBB84C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2016050== by 0xB3E4822: ??? ==2016050== by 0xB3E496F: ??? ==2016050== by 0xFB796DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2016050== by 0xFB79938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2016050== by 0xFB2F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2016050== by 0xFAD42DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2016050== by 0xB4EA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2016050== by 0xB483D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2016050== by 0xA15AD38: PetscInitialize (pinit.c:924) ==2016050== by 0xA0312DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2016050== by 0xA03132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2016050== by 0x12A9B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2016050== by 0x125733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2016050== by 0x127D56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2016050== by 0x127C52: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2016050== by 0x128265: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2016050== by 0x123F35: main (TestBidomainDistributedMesh.cpp:18) ==2016050== ==2016050== Open file descriptor 116: ==2016050== ==2016050== ==2016050== Open file descriptor 112: ==2016050== ==2016050== ==2016050== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainDistributedMesh_valgrind.txt ==2016050== ==2016050== ==2016050== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2016050== ==2016050== ==2016050== ==2016050== HEAP SUMMARY: ==2016050== in use at exit: 701,223 bytes in 9,387 blocks ==2016050== total heap usage: 430,574 allocs, 421,187 frees, 1,452,472,952 bytes allocated ==2016050== ==2016050== LEAK SUMMARY: ==2016050== definitely lost: 0 bytes in 0 blocks ==2016050== indirectly lost: 0 bytes in 0 blocks ==2016050== possibly lost: 0 bytes in 0 blocks ==2016050== still reachable: 24 bytes in 2 blocks ==2016050== suppressed: 701,199 bytes in 9,385 blocks ==2016050== Reachable blocks (those to which a pointer was found) are not shown. ==2016050== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2016050== ==2016050== For lists of detected and suppressed errors, rerun with: -s ==2016050== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 53 from 36)