==2016066== Memcheck, a memory error detector ==2016066== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2016066== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2016066== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainTissue -malloc_debug -malloc_dump -memory_info ==2016066== Parent PID: 1999474 ==2016066== ==2016066== ==2016066== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2016066== Open file descriptor 12: ==2016066== at 0xBB9622D: pipe (pipe.c:29) ==2016066== by 0x1431D07D: ??? ==2016066== by 0xFB214CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2016066== by 0xBF12418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2016066== by 0xBEABD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2016066== by 0xA24BD38: PetscInitialize (pinit.c:924) ==2016066== by 0xA0C02DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2016066== by 0xA0C032D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2016066== by 0x1397A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2016066== by 0x133EC3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2016066== by 0x136612: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2016066== by 0x13650E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2016066== by 0x136B21: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2016066== by 0x1326C5: main (TestBidomainTissue.cpp:18) ==2016066== ==2016066== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2016066== at 0xBB9ABCC: __open_nocancel (open64_nocancel.c:39) ==2016066== by 0xBB1EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2016066== by 0xA0F5822: ??? ==2016066== by 0xA0F596F: ??? ==2016066== by 0xFBC66DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2016066== by 0xFBC6938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2016066== by 0xFB7C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2016066== by 0xFB212DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2016066== by 0xBF12418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2016066== by 0xBEABD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2016066== by 0xA24BD38: PetscInitialize (pinit.c:924) ==2016066== by 0xA0C02DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2016066== by 0xA0C032D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2016066== by 0x1397A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2016066== by 0x133EC3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2016066== by 0x136612: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2016066== by 0x13650E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2016066== by 0x136B21: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2016066== by 0x1326C5: main (TestBidomainTissue.cpp:18) ==2016066== ==2016066== Open file descriptor 116: ==2016066== ==2016066== ==2016066== Open file descriptor 112: ==2016066== ==2016066== ==2016066== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainTissue_valgrind.txt ==2016066== ==2016066== ==2016066== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2016066== ==2016066== ==2016066== ==2016066== HEAP SUMMARY: ==2016066== in use at exit: 700,743 bytes in 9,377 blocks ==2016066== total heap usage: 194,351 allocs, 184,974 frees, 1,396,330,688 bytes allocated ==2016066== ==2016066== LEAK SUMMARY: ==2016066== definitely lost: 0 bytes in 0 blocks ==2016066== indirectly lost: 0 bytes in 0 blocks ==2016066== possibly lost: 0 bytes in 0 blocks ==2016066== still reachable: 24 bytes in 2 blocks ==2016066== suppressed: 700,719 bytes in 9,375 blocks ==2016066== Reachable blocks (those to which a pointer was found) are not shown. ==2016066== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2016066== ==2016066== For lists of detected and suppressed errors, rerun with: -s ==2016066== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 35 from 35)