==2016092== Memcheck, a memory error detector ==2016092== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2016092== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2016092== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainWithSvi -malloc_debug -malloc_dump -memory_info ==2016092== Parent PID: 1999474 ==2016092== ==2016092== ==2016092== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2016092== Open file descriptor 12: ==2016092== at 0xA7D622D: pipe (pipe.c:29) ==2016092== by 0x1431D07D: ??? ==2016092== by 0xFB214CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2016092== by 0xBECE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2016092== by 0xBE67D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2016092== by 0xAB5ED38: PetscInitialize (pinit.c:924) ==2016092== by 0xA0C02DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2016092== by 0xA0C032D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2016092== by 0x120EA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2016092== by 0x11C673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2016092== by 0x11EA90: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2016092== by 0x11E98B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2016092== by 0x11EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2016092== by 0x11AE75: main (TestBidomainWithSvi.cpp:18) ==2016092== ==2016092== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2016092== at 0xA7DABCC: __open_nocancel (open64_nocancel.c:39) ==2016092== by 0xA75EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2016092== by 0xA0F5822: ??? ==2016092== by 0xA0F596F: ??? ==2016092== by 0xFBC66DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2016092== by 0xFBC6938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2016092== by 0xFB7C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2016092== by 0xFB212DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2016092== by 0xBECE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2016092== by 0xBE67D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2016092== by 0xAB5ED38: PetscInitialize (pinit.c:924) ==2016092== by 0xA0C02DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2016092== by 0xA0C032D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2016092== by 0x120EA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2016092== by 0x11C673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2016092== by 0x11EA90: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2016092== by 0x11E98B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2016092== by 0x11EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2016092== by 0x11AE75: main (TestBidomainWithSvi.cpp:18) ==2016092== ==2016092== Open file descriptor 116: ==2016092== ==2016092== ==2016092== Open file descriptor 112: ==2016092== ==2016092== ==2016092== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainWithSvi_valgrind.txt ==2016092== ==2016092== ==2016092== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2016092== ==2016092== ==2016092== ==2016092== HEAP SUMMARY: ==2016092== in use at exit: 701,152 bytes in 9,383 blocks ==2016092== total heap usage: 3,542,471 allocs, 3,533,088 frees, 2,061,743,242 bytes allocated ==2016092== ==2016092== LEAK SUMMARY: ==2016092== definitely lost: 0 bytes in 0 blocks ==2016092== indirectly lost: 0 bytes in 0 blocks ==2016092== possibly lost: 0 bytes in 0 blocks ==2016092== still reachable: 24 bytes in 2 blocks ==2016092== suppressed: 701,128 bytes in 9,381 blocks ==2016092== Reachable blocks (those to which a pointer was found) are not shown. ==2016092== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2016092== ==2016092== For lists of detected and suppressed errors, rerun with: -s ==2016092== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 69 from 31)