==2069666== Memcheck, a memory error detector ==2069666== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2069666== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2069666== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/ode/test/TestAbstractOdeSystem -malloc_debug -malloc_dump -memory_info ==2069666== Parent PID: 2068927 ==2069666== ==2069666== ==2069666== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2069666== Open file descriptor 12: ==2069666== at 0x640422D: pipe (pipe.c:29) ==2069666== by 0xB1E307D: ??? ==2069666== by 0x8CDA4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2069666== by 0x6039418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2069666== by 0x5FD2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2069666== by 0x4CC9D38: PetscInitialize (pinit.c:924) ==2069666== by 0x4B3D153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2069666== by 0x4B3D1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2069666== by 0x137AEF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2069666== by 0x1315E1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2069666== by 0x134746: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2069666== by 0x1345E6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2069666== by 0x134C7D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2069666== by 0x12EE55: main (TestAbstractOdeSystem.cpp:19) ==2069666== ==2069666== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2069666== at 0x6408BCC: __open_nocancel (open64_nocancel.c:39) ==2069666== by 0x638CC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2069666== by 0x4B71822: ??? ==2069666== by 0x4B7196F: ??? ==2069666== by 0x8D7F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2069666== by 0x8D7F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2069666== by 0x8D35922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2069666== by 0x8CDA2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2069666== by 0x6039418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2069666== by 0x5FD2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2069666== by 0x4CC9D38: PetscInitialize (pinit.c:924) ==2069666== by 0x4B3D153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2069666== by 0x4B3D1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2069666== by 0x137AEF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2069666== by 0x1315E1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2069666== by 0x134746: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2069666== by 0x1345E6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2069666== by 0x134C7D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2069666== by 0x12EE55: main (TestAbstractOdeSystem.cpp:19) ==2069666== ==2069666== Open file descriptor 116: ==2069666== ==2069666== ==2069666== Open file descriptor 112: ==2069666== ==2069666== ==2069666== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAbstractOdeSystem_valgrind.txt ==2069666== ==2069666== ==2069666== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2069666== ==2069666== ==2069666== ==2069666== HEAP SUMMARY: ==2069666== in use at exit: 700,327 bytes in 9,377 blocks ==2069666== total heap usage: 48,236 allocs, 38,859 frees, 1,353,411,591 bytes allocated ==2069666== ==2069666== LEAK SUMMARY: ==2069666== definitely lost: 0 bytes in 0 blocks ==2069666== indirectly lost: 0 bytes in 0 blocks ==2069666== possibly lost: 0 bytes in 0 blocks ==2069666== still reachable: 24 bytes in 2 blocks ==2069666== suppressed: 700,303 bytes in 9,375 blocks ==2069666== Reachable blocks (those to which a pointer was found) are not shown. ==2069666== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2069666== ==2069666== For lists of detected and suppressed errors, rerun with: -s ==2069666== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 39 from 39)