==2126613== Memcheck, a memory error detector ==2126613== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2126613== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2126613== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestGoldbeter1991OdeSystem -malloc_debug -malloc_dump -memory_info ==2126613== Parent PID: 2125056 ==2126613== ==2126613== ==2126613== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2126613== Open file descriptor 12: ==2126613== at 0xE69622D: pipe (pipe.c:29) ==2126613== by 0x18A1E07D: ??? ==2126613== by 0x12FC04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2126613== by 0xE2E3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2126613== by 0xE27CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2126613== by 0xCF73D38: PetscInitialize (pinit.c:924) ==2126613== by 0xCDE9153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2126613== by 0xCDE91A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2126613== by 0x124157: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2126613== by 0x11F6A3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2126613== by 0x121BF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2126613== by 0x121AF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2126613== by 0x122103: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2126613== by 0x11DEA5: main (TestGoldbeter1991OdeSystem.cpp:18) ==2126613== ==2126613== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2126613== at 0xE69ABCC: __open_nocancel (open64_nocancel.c:39) ==2126613== by 0xE61EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2126613== by 0xCE1D822: ??? ==2126613== by 0xCE1D96F: ??? ==2126613== by 0x130656DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2126613== by 0x13065938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2126613== by 0x1301B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2126613== by 0x12FC02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2126613== by 0xE2E3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2126613== by 0xE27CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2126613== by 0xCF73D38: PetscInitialize (pinit.c:924) ==2126613== by 0xCDE9153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2126613== by 0xCDE91A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2126613== by 0x124157: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2126613== by 0x11F6A3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2126613== by 0x121BF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2126613== by 0x121AF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2126613== by 0x122103: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2126613== by 0x11DEA5: main (TestGoldbeter1991OdeSystem.cpp:18) ==2126613== ==2126613== Open file descriptor 116: ==2126613== ==2126613== ==2126613== Open file descriptor 112: ==2126613== ==2126613== ==2126613== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGoldbeter1991OdeSystem_valgrind.txt ==2126613== ==2126613== ==2126613== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2126613== ==2126613== ==2126613== ==2126613== HEAP SUMMARY: ==2126613== in use at exit: 700,727 bytes in 9,377 blocks ==2126613== total heap usage: 64,947 allocs, 55,570 frees, 1,354,988,265 bytes allocated ==2126613== ==2126613== LEAK SUMMARY: ==2126613== definitely lost: 0 bytes in 0 blocks ==2126613== indirectly lost: 0 bytes in 0 blocks ==2126613== possibly lost: 0 bytes in 0 blocks ==2126613== still reachable: 24 bytes in 2 blocks ==2126613== suppressed: 700,703 bytes in 9,375 blocks ==2126613== Reachable blocks (those to which a pointer was found) are not shown. ==2126613== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2126613== ==2126613== For lists of detected and suppressed errors, rerun with: -s ==2126613== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)