==2139810== Memcheck, a memory error detector ==2139810== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2139810== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2139810== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==2139810== Parent PID: 2125056 ==2139810== ==2139810== ==2139810== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2139810== Open file descriptor 12: ==2139810== at 0xEFEE22D: pipe (pipe.c:29) ==2139810== by 0x18A1F07D: ??? ==2139810== by 0x140294CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2139810== by 0x108EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2139810== by 0x10888D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2139810== by 0xF57FD38: PetscInitialize (pinit.c:924) ==2139810== by 0xE80C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2139810== by 0xE80C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2139810== by 0x135832: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2139810== by 0x1303C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2139810== by 0x133048: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2139810== by 0x132EE8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2139810== by 0x13357F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2139810== by 0x12E7B5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==2139810== ==2139810== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2139810== at 0xEFF2BCC: __open_nocancel (open64_nocancel.c:39) ==2139810== by 0xEF76C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2139810== by 0xE840822: ??? ==2139810== by 0xE84096F: ??? ==2139810== by 0x140CE6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2139810== by 0x140CE938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2139810== by 0x14084922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2139810== by 0x140292DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2139810== by 0x108EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2139810== by 0x10888D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2139810== by 0xF57FD38: PetscInitialize (pinit.c:924) ==2139810== by 0xE80C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2139810== by 0xE80C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2139810== by 0x135832: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2139810== by 0x1303C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2139810== by 0x133048: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2139810== by 0x132EE8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2139810== by 0x13357F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2139810== by 0x12E7B5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==2139810== ==2139810== Open file descriptor 116: ==2139810== ==2139810== ==2139810== Open file descriptor 112: ==2139810== ==2139810== ==2139810== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPdes_valgrind.txt ==2139810== ==2139810== ==2139810== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2139810== ==2139810== ==2139810== ==2139810== HEAP SUMMARY: ==2139810== in use at exit: 700,759 bytes in 9,378 blocks ==2139810== total heap usage: 2,358,519 allocs, 2,349,141 frees, 1,791,517,174 bytes allocated ==2139810== ==2139810== LEAK SUMMARY: ==2139810== definitely lost: 0 bytes in 0 blocks ==2139810== indirectly lost: 0 bytes in 0 blocks ==2139810== possibly lost: 0 bytes in 0 blocks ==2139810== still reachable: 56 bytes in 3 blocks ==2139810== suppressed: 700,703 bytes in 9,375 blocks ==2139810== Reachable blocks (those to which a pointer was found) are not shown. ==2139810== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2139810== ==2139810== For lists of detected and suppressed errors, rerun with: -s ==2139810== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)