==2194917== Memcheck, a memory error detector ==2194917== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2194917== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2194917== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCvodeWithJacobian -malloc_debug -malloc_dump -memory_info ==2194917== Parent PID: 2178034 ==2194917== ==2194917== ==2194917== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2194917== Open file descriptor 12: ==2194917== at 0x9C6522D: pipe (pipe.c:29) ==2194917== by 0x1431E07D: ??? ==2194917== by 0xEE164CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2194917== by 0x9898418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2194917== by 0x9831D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2194917== by 0x8508D38: PetscInitialize (pinit.c:924) ==2194917== by 0x83DF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2194917== by 0x83DF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2194917== by 0x117769: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2194917== by 0x1133B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2194917== by 0x1155A2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2194917== by 0x11549E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2194917== by 0x115AB1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2194917== by 0x111BB5: main (TestCvodeWithJacobian.cpp:18) ==2194917== ==2194917== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2194917== at 0x9C69BCC: __open_nocancel (open64_nocancel.c:39) ==2194917== by 0x9BEDC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2194917== by 0x9792822: ??? ==2194917== by 0x979296F: ??? ==2194917== by 0xEEBB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2194917== by 0xEEBB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2194917== by 0xEE71922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2194917== by 0xEE162DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2194917== by 0x9898418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2194917== by 0x9831D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2194917== by 0x8508D38: PetscInitialize (pinit.c:924) ==2194917== by 0x83DF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2194917== by 0x83DF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2194917== by 0x117769: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2194917== by 0x1133B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2194917== by 0x1155A2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2194917== by 0x11549E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2194917== by 0x115AB1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2194917== by 0x111BB5: main (TestCvodeWithJacobian.cpp:18) ==2194917== ==2194917== Open file descriptor 116: ==2194917== ==2194917== ==2194917== Open file descriptor 112: ==2194917== ==2194917== ==2194917== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCvodeWithJacobian_valgrind.txt ==2194917== ==2194917== ==2194917== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2194917== ==2194917== ==2194917== ==2194917== HEAP SUMMARY: ==2194917== in use at exit: 700,743 bytes in 9,377 blocks ==2194917== total heap usage: 76,301 allocs, 66,924 frees, 1,357,715,328 bytes allocated ==2194917== ==2194917== LEAK SUMMARY: ==2194917== definitely lost: 0 bytes in 0 blocks ==2194917== indirectly lost: 0 bytes in 0 blocks ==2194917== possibly lost: 0 bytes in 0 blocks ==2194917== still reachable: 24 bytes in 2 blocks ==2194917== suppressed: 700,719 bytes in 9,375 blocks ==2194917== Reachable blocks (those to which a pointer was found) are not shown. ==2194917== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2194917== ==2194917== For lists of detected and suppressed errors, rerun with: -s ==2194917== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)