==2179815== Memcheck, a memory error detector ==2179815== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2179815== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2179815== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==2179815== Parent PID: 2178034 ==2179815== ==2179815== ==2179815== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2179815== Open file descriptor 12: ==2179815== at 0xF91922D: pipe (pipe.c:29) ==2179815== by 0x196A507D: ??? ==2179815== by 0x14CB14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2179815== by 0x11575418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2179815== by 0x1150ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2179815== by 0x10205D38: PetscInitialize (pinit.c:924) ==2179815== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2179815== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2179815== by 0x2EFABE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2179815== by 0x2E6479: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2179815== by 0x2EAD7E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2179815== by 0x2EAC1E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2179815== by 0x2EB2B5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2179815== by 0x2E4895: main (TestMeshBasedCellPopulation.cpp:19) ==2179815== ==2179815== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2179815== at 0xF91DBCC: __open_nocancel (open64_nocancel.c:39) ==2179815== by 0xF8A1C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2179815== by 0xF129822: ??? ==2179815== by 0xF12996F: ??? ==2179815== by 0x14D566DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2179815== by 0x14D56938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2179815== by 0x14D0C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2179815== by 0x14CB12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2179815== by 0x11575418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2179815== by 0x1150ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2179815== by 0x10205D38: PetscInitialize (pinit.c:924) ==2179815== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2179815== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2179815== by 0x2EFABE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2179815== by 0x2E6479: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2179815== by 0x2EAD7E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2179815== by 0x2EAC1E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2179815== by 0x2EB2B5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2179815== by 0x2E4895: main (TestMeshBasedCellPopulation.cpp:19) ==2179815== ==2179815== Open file descriptor 116: ==2179815== ==2179815== ==2179815== Open file descriptor 112: ==2179815== ==2179815== ==2179815== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulation_valgrind.txt ==2179815== ==2179815== ==2179815== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2179815== ==2179815== ==2179815== ==2179815== HEAP SUMMARY: ==2179815== in use at exit: 700,759 bytes in 9,378 blocks ==2179815== total heap usage: 147,536 allocs, 138,158 frees, 1,381,739,934 bytes allocated ==2179815== ==2179815== LEAK SUMMARY: ==2179815== definitely lost: 0 bytes in 0 blocks ==2179815== indirectly lost: 0 bytes in 0 blocks ==2179815== possibly lost: 0 bytes in 0 blocks ==2179815== still reachable: 56 bytes in 3 blocks ==2179815== suppressed: 700,703 bytes in 9,375 blocks ==2179815== Reachable blocks (those to which a pointer was found) are not shown. ==2179815== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2179815== ==2179815== For lists of detected and suppressed errors, rerun with: -s ==2179815== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)