==2180439== Memcheck, a memory error detector ==2180439== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2180439== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2180439== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==2180439== Parent PID: 2178034 ==2180439== ==2180439== ==2180439== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2180439== Open file descriptor 12: ==2180439== at 0xFCB622D: pipe (pipe.c:29) ==2180439== by 0x196A407D: ??? ==2180439== by 0x14CA74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2180439== by 0x11575418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2180439== by 0x1150ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2180439== by 0x10205D38: PetscInitialize (pinit.c:924) ==2180439== by 0xF4912DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2180439== by 0xF49132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2180439== by 0x226536: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2180439== by 0x21FB71: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2180439== by 0x2236DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2180439== by 0x22357C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2180439== by 0x223C13: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2180439== by 0x21DF55: main (TestOffLatticeSimulationWithPdes.cpp:19) ==2180439== ==2180439== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2180439== at 0xFCBABCC: __open_nocancel (open64_nocancel.c:39) ==2180439== by 0xFC3EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2180439== by 0xF4C6822: ??? ==2180439== by 0xF4C696F: ??? ==2180439== by 0x14D4C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2180439== by 0x14D4C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2180439== by 0x14D02922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2180439== by 0x14CA72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2180439== by 0x11575418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2180439== by 0x1150ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2180439== by 0x10205D38: PetscInitialize (pinit.c:924) ==2180439== by 0xF4912DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2180439== by 0xF49132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2180439== by 0x226536: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2180439== by 0x21FB71: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2180439== by 0x2236DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2180439== by 0x22357C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2180439== by 0x223C13: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2180439== by 0x21DF55: main (TestOffLatticeSimulationWithPdes.cpp:19) ==2180439== ==2180439== Open file descriptor 116: ==2180439== ==2180439== ==2180439== Open file descriptor 112: ==2180439== ==2180439== ==2180439== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==2180439== ==2180439== ==2180439== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2180439== ==2180439== ==2180439== ==2180439== HEAP SUMMARY: ==2180439== in use at exit: 700,688 bytes in 9,374 blocks ==2180439== total heap usage: 7,488,883 allocs, 7,479,509 frees, 2,658,290,036 bytes allocated ==2180439== ==2180439== LEAK SUMMARY: ==2180439== definitely lost: 0 bytes in 0 blocks ==2180439== indirectly lost: 0 bytes in 0 blocks ==2180439== possibly lost: 0 bytes in 0 blocks ==2180439== still reachable: 56 bytes in 3 blocks ==2180439== suppressed: 700,632 bytes in 9,371 blocks ==2180439== Reachable blocks (those to which a pointer was found) are not shown. ==2180439== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2180439== ==2180439== For lists of detected and suppressed errors, rerun with: -s ==2180439== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)