==2215103== Memcheck, a memory error detector ==2215103== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2215103== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2215103== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulationWithGhostNodes -malloc_debug -malloc_dump -memory_info ==2215103== Parent PID: 2213417 ==2215103== ==2215103== ==2215103== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2215103== Open file descriptor 12: ==2215103== at 0x1010622D: pipe (pipe.c:29) ==2215103== by 0x18A1F07D: ??? ==2215103== by 0x13F824CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2215103== by 0xF927418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2215103== by 0xF8C0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2215103== by 0xE597D38: PetscInitialize (pinit.c:924) ==2215103== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2215103== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2215103== by 0x159CA9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2215103== by 0x1521AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2215103== by 0x15565A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2215103== by 0x1554FA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2215103== by 0x155B91: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2215103== by 0x1505D5: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==2215103== ==2215103== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2215103== at 0x1010ABCC: __open_nocancel (open64_nocancel.c:39) ==2215103== by 0x1008EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2215103== by 0xF821822: ??? ==2215103== by 0xF82196F: ??? ==2215103== by 0x140276DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2215103== by 0x14027938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2215103== by 0x13FDD922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2215103== by 0x13F822DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2215103== by 0xF927418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2215103== by 0xF8C0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2215103== by 0xE597D38: PetscInitialize (pinit.c:924) ==2215103== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2215103== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2215103== by 0x159CA9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2215103== by 0x1521AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2215103== by 0x15565A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2215103== by 0x1554FA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2215103== by 0x155B91: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2215103== by 0x1505D5: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==2215103== ==2215103== Open file descriptor 116: ==2215103== ==2215103== ==2215103== Open file descriptor 112: ==2215103== ==2215103== ==2215103== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulationWithGhostNodes_valgrind.txt ==2215103== ==2215103== ==2215103== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2215103== ==2215103== ==2215103== ==2215103== HEAP SUMMARY: ==2215103== in use at exit: 700,759 bytes in 9,378 blocks ==2215103== total heap usage: 223,419 allocs, 214,041 frees, 1,378,724,030 bytes allocated ==2215103== ==2215103== LEAK SUMMARY: ==2215103== definitely lost: 0 bytes in 0 blocks ==2215103== indirectly lost: 0 bytes in 0 blocks ==2215103== possibly lost: 0 bytes in 0 blocks ==2215103== still reachable: 56 bytes in 3 blocks ==2215103== suppressed: 700,703 bytes in 9,375 blocks ==2215103== Reachable blocks (those to which a pointer was found) are not shown. ==2215103== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2215103== ==2215103== For lists of detected and suppressed errors, rerun with: -s ==2215103== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)