==2215648== Memcheck, a memory error detector ==2215648== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2215648== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2215648== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==2215648== Parent PID: 2213417 ==2215648== ==2215648== ==2215648== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2215648== Open file descriptor 12: ==2215648== at 0xF03022D: pipe (pipe.c:29) ==2215648== by 0x18A1F07D: ??? ==2215648== by 0x140294CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2215648== by 0x108EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2215648== by 0x10888D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2215648== by 0xF57FD38: PetscInitialize (pinit.c:924) ==2215648== by 0xE80C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2215648== by 0xE80C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2215648== by 0x226536: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2215648== by 0x21FB71: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2215648== by 0x2236DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2215648== by 0x22357C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2215648== by 0x223C13: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2215648== by 0x21DF55: main (TestOffLatticeSimulationWithPdes.cpp:19) ==2215648== ==2215648== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2215648== at 0xF034BCC: __open_nocancel (open64_nocancel.c:39) ==2215648== by 0xEFB8C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2215648== by 0xE840822: ??? ==2215648== by 0xE84096F: ??? ==2215648== by 0x140CE6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2215648== by 0x140CE938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2215648== by 0x14084922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2215648== by 0x140292DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2215648== by 0x108EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2215648== by 0x10888D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2215648== by 0xF57FD38: PetscInitialize (pinit.c:924) ==2215648== by 0xE80C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2215648== by 0xE80C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2215648== by 0x226536: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2215648== by 0x21FB71: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2215648== by 0x2236DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2215648== by 0x22357C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2215648== by 0x223C13: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2215648== by 0x21DF55: main (TestOffLatticeSimulationWithPdes.cpp:19) ==2215648== ==2215648== Open file descriptor 116: ==2215648== ==2215648== ==2215648== Open file descriptor 112: ==2215648== ==2215648== ==2215648== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==2215648== ==2215648== ==2215648== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2215648== ==2215648== ==2215648== ==2215648== HEAP SUMMARY: ==2215648== in use at exit: 700,688 bytes in 9,374 blocks ==2215648== total heap usage: 7,497,614 allocs, 7,488,240 frees, 2,659,655,838 bytes allocated ==2215648== ==2215648== LEAK SUMMARY: ==2215648== definitely lost: 0 bytes in 0 blocks ==2215648== indirectly lost: 0 bytes in 0 blocks ==2215648== possibly lost: 0 bytes in 0 blocks ==2215648== still reachable: 56 bytes in 3 blocks ==2215648== suppressed: 700,632 bytes in 9,371 blocks ==2215648== Reachable blocks (those to which a pointer was found) are not shown. ==2215648== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2215648== ==2215648== For lists of detected and suppressed errors, rerun with: -s ==2215648== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)