==2291686== Memcheck, a memory error detector ==2291686== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2291686== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2291686== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==2291686== Parent PID: 2290032 ==2291686== ==2291686== ==2291686== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2291686== Open file descriptor 12: ==2291686== at 0xF83022D: pipe (pipe.c:29) ==2291686== by 0x196A507D: ??? ==2291686== by 0x14CB14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2291686== by 0x1148E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2291686== by 0x11427D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2291686== by 0x1011CD38: PetscInitialize (pinit.c:924) ==2291686== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2291686== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2291686== by 0x16556C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2291686== by 0x15DBC9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2291686== by 0x160D98: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2291686== by 0x160C38: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2291686== by 0x1612CF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2291686== by 0x15BFE5: main (TestCaBasedCellPopulation.cpp:19) ==2291686== ==2291686== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2291686== at 0xF834BCC: __open_nocancel (open64_nocancel.c:39) ==2291686== by 0xF7B8C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2291686== by 0xF129822: ??? ==2291686== by 0xF12996F: ??? ==2291686== by 0x14D566DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2291686== by 0x14D56938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2291686== by 0x14D0C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2291686== by 0x14CB12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2291686== by 0x1148E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2291686== by 0x11427D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2291686== by 0x1011CD38: PetscInitialize (pinit.c:924) ==2291686== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2291686== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2291686== by 0x16556C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2291686== by 0x15DBC9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2291686== by 0x160D98: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2291686== by 0x160C38: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2291686== by 0x1612CF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2291686== by 0x15BFE5: main (TestCaBasedCellPopulation.cpp:19) ==2291686== ==2291686== Open file descriptor 116: ==2291686== ==2291686== ==2291686== Open file descriptor 112: ==2291686== ==2291686== ==2291686== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaBasedCellPopulation_valgrind.txt ==2291686== ==2291686== ==2291686== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2291686== ==2291686== ==2291686== ==2291686== HEAP SUMMARY: ==2291686== in use at exit: 700,759 bytes in 9,378 blocks ==2291686== total heap usage: 78,115 allocs, 68,737 frees, 1,362,461,527 bytes allocated ==2291686== ==2291686== LEAK SUMMARY: ==2291686== definitely lost: 0 bytes in 0 blocks ==2291686== indirectly lost: 0 bytes in 0 blocks ==2291686== possibly lost: 0 bytes in 0 blocks ==2291686== still reachable: 56 bytes in 3 blocks ==2291686== suppressed: 700,703 bytes in 9,375 blocks ==2291686== Reachable blocks (those to which a pointer was found) are not shown. ==2291686== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2291686== ==2291686== For lists of detected and suppressed errors, rerun with: -s ==2291686== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 38 from 38)