==2305540== Memcheck, a memory error detector ==2305540== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2305540== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2305540== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewSrnModelTutorial -malloc_debug -malloc_dump -memory_info ==2305540== Parent PID: 2290032 ==2305540== ==2305540== ==2305540== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2305540== Open file descriptor 12: ==2305540== at 0x1101122D: pipe (pipe.c:29) ==2305540== by 0x196A407D: ??? ==2305540== by 0x14C5A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2305540== by 0x10832418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2305540== by 0x107CBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2305540== by 0xF4C2D38: PetscInitialize (pinit.c:924) ==2305540== by 0xF3372DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2305540== by 0xF33732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2305540== by 0x261089: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2305540== by 0x25978B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2305540== by 0x25E30E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2305540== by 0x25E1AF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2305540== by 0x25E845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2305540== by 0x255DF5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==2305540== ==2305540== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2305540== at 0x11015BCC: __open_nocancel (open64_nocancel.c:39) ==2305540== by 0x10F99C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2305540== by 0xF36C822: ??? ==2305540== by 0xF36C96F: ??? ==2305540== by 0x14CFF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2305540== by 0x14CFF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2305540== by 0x14CB5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2305540== by 0x14C5A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2305540== by 0x10832418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2305540== by 0x107CBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2305540== by 0xF4C2D38: PetscInitialize (pinit.c:924) ==2305540== by 0xF3372DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2305540== by 0xF33732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2305540== by 0x261089: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2305540== by 0x25978B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2305540== by 0x25E30E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2305540== by 0x25E1AF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2305540== by 0x25E845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2305540== by 0x255DF5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==2305540== ==2305540== Open file descriptor 116: ==2305540== ==2305540== ==2305540== Open file descriptor 112: ==2305540== ==2305540== ==2305540== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewSrnModelTutorial_valgrind.txt ==2305540== ==2305540== ==2305540== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2305540== ==2305540== ==2305540== ==2305540== HEAP SUMMARY: ==2305540== in use at exit: 700,688 bytes in 9,374 blocks ==2305540== total heap usage: 3,819,558 allocs, 3,810,184 frees, 1,524,699,749 bytes allocated ==2305540== ==2305540== LEAK SUMMARY: ==2305540== definitely lost: 0 bytes in 0 blocks ==2305540== indirectly lost: 0 bytes in 0 blocks ==2305540== possibly lost: 0 bytes in 0 blocks ==2305540== still reachable: 56 bytes in 3 blocks ==2305540== suppressed: 700,632 bytes in 9,371 blocks ==2305540== Reachable blocks (those to which a pointer was found) are not shown. ==2305540== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2305540== ==2305540== For lists of detected and suppressed errors, rerun with: -s ==2305540== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)