==2305836== Memcheck, a memory error detector ==2305836== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2305836== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2305836== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestSimpleCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==2305836== Parent PID: 2290032 ==2305836== ==2305836== ==2305836== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2305836== Open file descriptor 12: ==2305836== at 0x1095522D: pipe (pipe.c:29) ==2305836== by 0x1B36607D: ??? ==2305836== by 0x154B54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2305836== by 0x1025D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2305836== by 0x101F6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2305836== by 0xEEEDD38: PetscInitialize (pinit.c:924) ==2305836== by 0xED622DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2305836== by 0xED6232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2305836== by 0x186CD7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2305836== by 0x17F2CB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2305836== by 0x18258E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2305836== by 0x18242E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2305836== by 0x182AC5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2305836== by 0x17BBF5: main (TestSimpleCellCycleModelsForCrypt.cpp:19) ==2305836== ==2305836== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2305836== at 0x10959BCC: __open_nocancel (open64_nocancel.c:39) ==2305836== by 0x108DDC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2305836== by 0xED97822: ??? ==2305836== by 0xED9796F: ??? ==2305836== by 0x1555A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2305836== by 0x1555A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2305836== by 0x15510922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2305836== by 0x154B52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2305836== by 0x1025D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2305836== by 0x101F6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2305836== by 0xEEEDD38: PetscInitialize (pinit.c:924) ==2305836== by 0xED622DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2305836== by 0xED6232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2305836== by 0x186CD7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2305836== by 0x17F2CB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2305836== by 0x18258E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2305836== by 0x18242E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2305836== by 0x182AC5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2305836== by 0x17BBF5: main (TestSimpleCellCycleModelsForCrypt.cpp:19) ==2305836== ==2305836== Open file descriptor 116: ==2305836== ==2305836== ==2305836== Open file descriptor 112: ==2305836== ==2305836== ==2305836== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimpleCellCycleModelsForCrypt_valgrind.txt ==2305836== ==2305836== ==2305836== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2305836== ==2305836== ==2305836== ==2305836== HEAP SUMMARY: ==2305836== in use at exit: 700,839 bytes in 9,379 blocks ==2305836== total heap usage: 756,047 allocs, 746,668 frees, 1,387,683,839 bytes allocated ==2305836== ==2305836== LEAK SUMMARY: ==2305836== definitely lost: 0 bytes in 0 blocks ==2305836== indirectly lost: 0 bytes in 0 blocks ==2305836== possibly lost: 0 bytes in 0 blocks ==2305836== still reachable: 120 bytes in 4 blocks ==2305836== suppressed: 700,719 bytes in 9,375 blocks ==2305836== Reachable blocks (those to which a pointer was found) are not shown. ==2305836== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2305836== ==2305836== For lists of detected and suppressed errors, rerun with: -s ==2305836== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)