==2291417== Memcheck, a memory error detector ==2291417== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2291417== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2291417== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==2291417== Parent PID: 2290032 ==2291417== ==2291417== ==2291417== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2291417== Open file descriptor 12: ==2291417== at 0x1104222D: pipe (pipe.c:29) ==2291417== by 0x196A407D: ??? ==2291417== by 0x14C164CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2291417== by 0x1094A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2291417== by 0x108E3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2291417== by 0xF5BAD38: PetscInitialize (pinit.c:924) ==2291417== by 0xF4912DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2291417== by 0xF49132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2291417== by 0x1294E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2291417== by 0x1249D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2291417== by 0x126F4A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2291417== by 0x126E45: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2291417== by 0x127459: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2291417== by 0x1231D5: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==2291417== ==2291417== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2291417== at 0x11046BCC: __open_nocancel (open64_nocancel.c:39) ==2291417== by 0x10FCAC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2291417== by 0x10844822: ??? ==2291417== by 0x1084496F: ??? ==2291417== by 0x14CBB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2291417== by 0x14CBB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2291417== by 0x14C71922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2291417== by 0x14C162DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2291417== by 0x1094A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2291417== by 0x108E3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2291417== by 0xF5BAD38: PetscInitialize (pinit.c:924) ==2291417== by 0xF4912DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2291417== by 0xF49132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2291417== by 0x1294E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2291417== by 0x1249D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2291417== by 0x126F4A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2291417== by 0x126E45: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2291417== by 0x127459: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2291417== by 0x1231D5: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==2291417== ==2291417== Open file descriptor 116: ==2291417== ==2291417== ==2291417== Open file descriptor 112: ==2291417== ==2291417== ==2291417== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithEllipticBoxDomainPdeModifier_valgrind.txt ==2291417== ==2291417== ==2291417== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2291417== ==2291417== ==2291417== ==2291417== HEAP SUMMARY: ==2291417== in use at exit: 700,688 bytes in 9,374 blocks ==2291417== total heap usage: 7,732,147 allocs, 7,722,773 frees, 2,197,467,474 bytes allocated ==2291417== ==2291417== LEAK SUMMARY: ==2291417== definitely lost: 0 bytes in 0 blocks ==2291417== indirectly lost: 0 bytes in 0 blocks ==2291417== possibly lost: 0 bytes in 0 blocks ==2291417== still reachable: 56 bytes in 3 blocks ==2291417== suppressed: 700,632 bytes in 9,371 blocks ==2291417== Reachable blocks (those to which a pointer was found) are not shown. ==2291417== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2291417== ==2291417== For lists of detected and suppressed errors, rerun with: -s ==2291417== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)