==2347874== Memcheck, a memory error detector ==2347874== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2347874== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2347874== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==2347874== Parent PID: 2346293 ==2347874== ==2347874== ==2347874== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2347874== Open file descriptor 12: ==2347874== at 0xD2E122D: pipe (pipe.c:29) ==2347874== by 0x18A1F07D: ??? ==2347874== by 0x1402B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2347874== by 0x10808418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2347874== by 0x107A1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2347874== by 0xF498D38: PetscInitialize (pinit.c:924) ==2347874== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2347874== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2347874== by 0x132B46: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2347874== by 0x12BE43: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2347874== by 0x12E998: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2347874== by 0x12E893: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2347874== by 0x12EEA7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2347874== by 0x12A645: main (TestCaUpdateRules.cpp:18) ==2347874== ==2347874== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2347874== at 0xD2E5BCC: __open_nocancel (open64_nocancel.c:39) ==2347874== by 0xD269C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2347874== by 0xCBD8822: ??? ==2347874== by 0xCBD896F: ??? ==2347874== by 0x140D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2347874== by 0x140D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2347874== by 0x14086922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2347874== by 0x1402B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2347874== by 0x10808418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2347874== by 0x107A1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2347874== by 0xF498D38: PetscInitialize (pinit.c:924) ==2347874== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2347874== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2347874== by 0x132B46: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2347874== by 0x12BE43: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2347874== by 0x12E998: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2347874== by 0x12E893: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2347874== by 0x12EEA7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2347874== by 0x12A645: main (TestCaUpdateRules.cpp:18) ==2347874== ==2347874== Open file descriptor 116: ==2347874== ==2347874== ==2347874== Open file descriptor 112: ==2347874== ==2347874== ==2347874== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==2347874== ==2347874== ==2347874== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2347874== ==2347874== ==2347874== ==2347874== HEAP SUMMARY: ==2347874== in use at exit: 700,759 bytes in 9,378 blocks ==2347874== total heap usage: 57,470 allocs, 48,092 frees, 1,354,211,875 bytes allocated ==2347874== ==2347874== LEAK SUMMARY: ==2347874== definitely lost: 0 bytes in 0 blocks ==2347874== indirectly lost: 0 bytes in 0 blocks ==2347874== possibly lost: 0 bytes in 0 blocks ==2347874== still reachable: 56 bytes in 3 blocks ==2347874== suppressed: 700,703 bytes in 9,375 blocks ==2347874== Reachable blocks (those to which a pointer was found) are not shown. ==2347874== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2347874== ==2347874== For lists of detected and suppressed errors, rerun with: -s ==2347874== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)