==2347579== Memcheck, a memory error detector ==2347579== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2347579== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2347579== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestParabolicBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==2347579== Parent PID: 2346293 ==2347579== ==2347579== ==2347579== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2347579== Open file descriptor 12: ==2347579== at 0x103FE22D: pipe (pipe.c:29) ==2347579== by 0x18A1F07D: ??? ==2347579== by 0x13F8B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2347579== by 0xFD06418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2347579== by 0xFC9FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2347579== by 0xE996D38: PetscInitialize (pinit.c:924) ==2347579== by 0xE80C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2347579== by 0xE80C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2347579== by 0x133C67: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2347579== by 0x12E57D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2347579== by 0x13121C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2347579== by 0x1310BC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2347579== by 0x131753: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2347579== by 0x12C9A5: main (TestParabolicBoxDomainPdeModifier.cpp:19) ==2347579== ==2347579== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2347579== at 0x10402BCC: __open_nocancel (open64_nocancel.c:39) ==2347579== by 0x10386C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2347579== by 0xE840822: ??? ==2347579== by 0xE84096F: ??? ==2347579== by 0x140306DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2347579== by 0x14030938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2347579== by 0x13FE6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2347579== by 0x13F8B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2347579== by 0xFD06418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2347579== by 0xFC9FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2347579== by 0xE996D38: PetscInitialize (pinit.c:924) ==2347579== by 0xE80C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2347579== by 0xE80C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2347579== by 0x133C67: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2347579== by 0x12E57D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2347579== by 0x13121C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2347579== by 0x1310BC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2347579== by 0x131753: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2347579== by 0x12C9A5: main (TestParabolicBoxDomainPdeModifier.cpp:19) ==2347579== ==2347579== Open file descriptor 116: ==2347579== ==2347579== ==2347579== Open file descriptor 112: ==2347579== ==2347579== ==2347579== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestParabolicBoxDomainPdeModifier_valgrind.txt ==2347579== ==2347579== ==2347579== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2347579== ==2347579== ==2347579== ==2347579== HEAP SUMMARY: ==2347579== in use at exit: 700,759 bytes in 9,378 blocks ==2347579== total heap usage: 2,608,856 allocs, 2,599,478 frees, 1,633,582,203 bytes allocated ==2347579== ==2347579== LEAK SUMMARY: ==2347579== definitely lost: 0 bytes in 0 blocks ==2347579== indirectly lost: 0 bytes in 0 blocks ==2347579== possibly lost: 0 bytes in 0 blocks ==2347579== still reachable: 56 bytes in 3 blocks ==2347579== suppressed: 700,703 bytes in 9,375 blocks ==2347579== Reachable blocks (those to which a pointer was found) are not shown. ==2347579== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2347579== ==2347579== For lists of detected and suppressed errors, rerun with: -s ==2347579== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)