==2347520== Memcheck, a memory error detector ==2347520== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2347520== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2347520== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimpleCellCycleModels -malloc_debug -malloc_dump -memory_info ==2347520== Parent PID: 2346293 ==2347520== ==2347520== ==2347520== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2347520== Open file descriptor 12: ==2347520== at 0xE45122D: pipe (pipe.c:29) ==2347520== by 0x18A1E07D: ??? ==2347520== by 0x12F6F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2347520== by 0xE0A0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2347520== by 0xE039D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2347520== by 0xCD30D38: PetscInitialize (pinit.c:924) ==2347520== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2347520== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2347520== by 0x137FA7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2347520== by 0x13098F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2347520== by 0x133A5C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2347520== by 0x1338FC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2347520== by 0x133F93: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2347520== by 0x12D2C5: main (TestSimpleCellCycleModels.cpp:19) ==2347520== ==2347520== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2347520== at 0xE455BCC: __open_nocancel (open64_nocancel.c:39) ==2347520== by 0xE3D9C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2347520== by 0xCBD8822: ??? ==2347520== by 0xCBD896F: ??? ==2347520== by 0x130146DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2347520== by 0x13014938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2347520== by 0x12FCA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2347520== by 0x12F6F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2347520== by 0xE0A0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2347520== by 0xE039D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2347520== by 0xCD30D38: PetscInitialize (pinit.c:924) ==2347520== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2347520== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2347520== by 0x137FA7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2347520== by 0x13098F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2347520== by 0x133A5C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2347520== by 0x1338FC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2347520== by 0x133F93: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2347520== by 0x12D2C5: main (TestSimpleCellCycleModels.cpp:19) ==2347520== ==2347520== Open file descriptor 116: ==2347520== ==2347520== ==2347520== Open file descriptor 112: ==2347520== ==2347520== ==2347520== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimpleCellCycleModels_valgrind.txt ==2347520== ==2347520== ==2347520== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2347520== ==2347520== ==2347520== ==2347520== HEAP SUMMARY: ==2347520== in use at exit: 700,791 bytes in 9,379 blocks ==2347520== total heap usage: 80,674 allocs, 71,295 frees, 1,357,291,572 bytes allocated ==2347520== ==2347520== LEAK SUMMARY: ==2347520== definitely lost: 0 bytes in 0 blocks ==2347520== indirectly lost: 0 bytes in 0 blocks ==2347520== possibly lost: 0 bytes in 0 blocks ==2347520== still reachable: 88 bytes in 4 blocks ==2347520== suppressed: 700,703 bytes in 9,375 blocks ==2347520== Reachable blocks (those to which a pointer was found) are not shown. ==2347520== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2347520== ==2347520== For lists of detected and suppressed errors, rerun with: -s ==2347520== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 40 from 40)